RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TMEM14AQ9Y6G1 99 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 FRYLO94915 3013 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 C7orf66A4D0T2 115 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 ALG1L2C9J202 215 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 PHYHO14832 338 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 ICOSLGO75144 302 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 ZNF432O94892 652 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 ZFPL1O95159 310 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 TCRBP04435 133 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 F13BP05160 661 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 NANOS3P60323 173 aaKnown RBP14.92□□□□□ -0.02
TMEM53-208ENST00000476724 ALKBH1Q13686 389 aaKnown RBP14.92□□□□□ -0.02
TMEM53-208ENST00000476724 EBPQ15125 230 aaKnown RBP14.92□□□□□ -0.02
TMEM53-208ENST00000476724 NR0B2Q15466 257 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 WDR74Q6RFH5 385 aaPredicted RBP14.92□□□□□ -0.02
TMEM53-208ENST00000476724 LYPD4Q6UWN0 246 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 CDH24Q86UP0 819 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 LILRB4Q8NHJ6 448 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.92□□□□□ -0.02
TMEM53-208ENST00000476724 KTI12Q96EK9 354 aaPredicted RBP14.92□□□□□ -0.02
TMEM53-208ENST00000476724 SCMH1Q96GD3 660 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 SLC41A2Q96JW4 573 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 ZFP3Q96NJ6 502 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 GAL3ST4Q96RP7 486 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 NUDT9Q9BW91 350 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 GALNT9Q9HCQ5 603 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 ZNF304Q9HCX3 659 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 SRA1Q9HD15 236 aaKnown RBP14.92□□□□□ -0.02
TMEM53-208ENST00000476724 DHCR7Q9UBM7 475 aaKnown RBP14.92□□□□□ -0.02
TMEM53-208ENST00000476724 MRPS7Q9Y2R9 242 aaKnown RBP14.92□□□□□ -0.02
TMEM53-208ENST00000476724 V9GY05 133 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 A0A0C4DFX4 3053 aa14.92□□□□□ -0.02
TMEM53-208ENST00000476724 FER1L5A0AVI2 2057 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 A0A1W2PQM1 296 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 TMEM72A0PK05 275 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 FAM171A2A8MVW0 826 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 HCRTR2O43614 444 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 NDUFB5O43674 189 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 TSPAN2O60636 221 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 UPK3AO75631 287 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 PGCP20142 388 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 FBLP22087 321 aaKnown RBP14.91□□□□□ -0.02
TMEM53-208ENST00000476724 SRP9P49458 86 aaKnown RBP14.91□□□□□ -0.02
TMEM53-208ENST00000476724 ZNF117Q03924 483 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 EGR3Q06889 387 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 Q499Y3 187 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 TRIM61Q5EBN2 209 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 YOD1Q5VVQ6 348 aaPredicted RBP14.91□□□□□ -0.02
TMEM53-208ENST00000476724 PRSS42Q7Z5A4 293 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 OR5AK2Q8NH90 309 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 LGALS14Q8TCE9 139 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 SMIM4Q8WVI0 70 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 TAAR8Q969N4 342 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 RNF166Q96A37 237 aaPredicted RBP14.91□□□□□ -0.02
TMEM53-208ENST00000476724 KLHL15Q96M94 604 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 TSPAN32Q96QS1 320 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 ACTR6Q9GZN1 396 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 PLSCR3Q9NRY6 295 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 MRPL39Q9NYK5 338 aaKnown RBP14.91□□□□□ -0.02
TMEM53-208ENST00000476724 COPS7AQ9UBW8 275 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 CLEC4AQ9UMR7 237 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 BOLA1Q9Y3E2 137 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 NUP210LQ5VU65 1888 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 TRAV36DV7A0A075B6V5 113 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 ARPC4-TTLL3A0A0A6YYG9 625 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 OR6C76A6NM76 312 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 SULT1B1O43704 296 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 MT-ATP6P00846 226 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 CD3GP09693 182 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 CALCBP10092 127 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 PNLIPRP2P54317 469 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 DGCR2P98153 550 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 MESTQ5EB52 335 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 EEF1A1P5Q5VTE0 462 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 LIPNQ5VXI9 398 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 SIAH3Q8IW03 269 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 HYLS1Q96M11 299 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 TSSK2Q96PF2 358 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 MED28Q9H204 178 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 WDR76Q9H967 626 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 STMN3Q9NZ72 180 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 MRM2Q9UI43 246 aaKnown RBP14.91□□□□□ -0.02
TMEM53-208ENST00000476724 LAMP5Q9UJQ1 280 aa14.91□□□□□ -0.02
TMEM53-208ENST00000476724 A0A0A6YYJ9 748 aa14.9□□□□□ -0.02
TMEM53-208ENST00000476724 A0A0B4J203 849 aa14.9□□□□□ -0.02
TMEM53-208ENST00000476724 IDSB3KWA1 339 aa14.9□□□□□ -0.02
TMEM53-208ENST00000476724 BGLAPP02818 100 aa14.9□□□□□ -0.02
TMEM53-208ENST00000476724 PRKCAP17252 672 aa14.9□□□□□ -0.02
TMEM53-208ENST00000476724 ITPKBP27987 946 aa14.9□□□□□ -0.02
TMEM53-208ENST00000476724 GRPRP30550 384 aa14.9□□□□□ -0.02
TMEM53-208ENST00000476724 NR0B1P51843 470 aaKnown RBP14.9□□□□□ -0.02
TMEM53-208ENST00000476724 CCL7P80098 99 aa14.9□□□□□ -0.02
TMEM53-208ENST00000476724 SNTB2Q13425 540 aaKnown RBP14.9□□□□□ -0.02
TMEM53-208ENST00000476724 NSDHLQ15738 373 aa14.9□□□□□ -0.02
TMEM53-208ENST00000476724 SLC29A4Q7RTT9 530 aa14.9□□□□□ -0.02
TMEM53-208ENST00000476724 MAMDC2Q7Z304 686 aaPredicted RBP14.9□□□□□ -0.02
TMEM53-208ENST00000476724 KMT5CQ86Y97 462 aa14.9□□□□□ -0.02
TMEM53-208ENST00000476724 CMTM4Q8IZR5 234 aa14.9□□□□□ -0.02
TMEM53-208ENST00000476724 C15orf40Q8WUR7 153 aa14.9□□□□□ -0.02
TMEM53-208ENST00000476724 MAP6Q96JE9 813 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms