RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 HIF3AQ9Y2N7 669 aa14.41□□□□□ -0.1
ATG4B-216ENST00000475195 MAGED1Q9Y5V3 778 aaPredicted RBP14.41□□□□□ -0.1
ATG4B-216ENST00000475195 DSCAMO60469 2012 aa14.41□□□□□ -0.1
ATG4B-216ENST00000475195 PRRC2AP48634 2157 aaKnown RBP14.4□□□□□ -0.1
ATG4B-216ENST00000475195 NPIPB13A6NJU9 1138 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 ZNF99A8MXY4 864 aaPredicted RBP14.4□□□□□ -0.1
ATG4B-216ENST00000475195 SHISA9B4DS77 424 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 NPIPB4C9JG80 1138 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 ARPC2O15144 300 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 WNT11O96014 354 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 UMPSP11172 480 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 IFI30P13284 250 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 CD40P25942 277 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 BIDP55957 195 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 RPS4XP62701 263 aaKnown RBP14.4□□□□□ -0.1
ATG4B-216ENST00000475195 ARF1P84077 181 aaKnown RBP14.4□□□□□ -0.1
ATG4B-216ENST00000475195 VLDLRP98155 873 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 RPL18Q07020 188 aaKnown RBP14.4□□□□□ -0.1
ATG4B-216ENST00000475195 CAMK2DQ13557 499 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 LAPTM4AQ15012 233 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 CEACAM16Q2WEN9 425 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 ANKDD1AQ495B1 522 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 ZNF672Q499Z4 452 aaPredicted RBP14.4□□□□□ -0.1
ATG4B-216ENST00000475195 HIKESHIQ53FT3 197 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 KLHL17Q6TDP4 642 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 TMEM108Q6UXF1 575 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 RINLQ6ZS11 566 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 TMPRSS11FQ6ZWK6 438 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 MBOAT2Q6ZWT7 520 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 NANOGNBQ7Z5D8 188 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 CYP4Z1Q86W10 505 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 CCDC36Q8IYA8 594 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 SLC7A13Q8TCU3 470 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 AKAP1Q92667 903 aaKnown RBP eCLIP14.4□□□□□ -0.1
ATG4B-216ENST00000475195 TMEM54Q969K7 222 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 SLC25A44Q96H78 314 aaPredicted RBP14.4□□□□□ -0.1
ATG4B-216ENST00000475195 FUZQ9BT04 418 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 MRPL13Q9BYD1 178 aaKnown RBP14.4□□□□□ -0.1
ATG4B-216ENST00000475195 UBTD1Q9HAC8 227 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 TAS2R1Q9NYW7 299 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 ACTR3BQ9P1U1 418 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 CRNNQ9UBG3 495 aaPredicted RBP14.4□□□□□ -0.1
ATG4B-216ENST00000475195 VPS13CQ709C8 3753 aa14.4□□□□□ -0.1
ATG4B-216ENST00000475195 CENPBD1B2RD01 187 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 M0R3G1 203 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 PIP5K1CO60331 668 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 DANCRP0C864 163 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 PAX1P15863 534 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 CDH2P19022 906 aaPredicted RBP14.39□□□□□ -0.11
ATG4B-216ENST00000475195 MAKP20794 623 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 AQP2P41181 271 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 ZNF83P51522 516 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 C3orf36Q3SXR2 165 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 LRFN4Q6PJG9 635 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 TBPL2Q6SJ96 375 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 TRPM8Q7Z2W7 1104 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 NRMQ8IXM6 262 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 LRRC75A-AS1Q8N1F1 130 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 LRRC75AQ8NAA5 344 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 NSMCE2Q96MF7 247 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 MOV10Q9HCE1 1003 aaKnown RBP14.39□□□□□ -0.11
ATG4B-216ENST00000475195 INIPQ9NRY2 104 aa14.39□□□□□ -0.11
ATG4B-216ENST00000475195 FAM32AQ9Y421 112 aaKnown RBP14.39□□□□□ -0.11
ATG4B-216ENST00000475195 ABCD4O14678 606 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 BCL10O95999 233 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 F13BP05160 661 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 H1F0P07305 194 aaKnown RBP14.38□□□□□ -0.11
ATG4B-216ENST00000475195 PGA4P0DJD7 388 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 PGA3P0DJD8 388 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 ITGA2P17301 1181 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 HOXC12P31275 282 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 SLC9A3P48764 834 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 ZNF133P52736 654 aaPredicted RBP14.38□□□□□ -0.11
ATG4B-216ENST00000475195 TRIM25Q14258 630 aaKnown RBP14.38□□□□□ -0.11
ATG4B-216ENST00000475195 ARMC4Q5T2S8 1044 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 CARD17Q5XLA6 110 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 PIWIL3Q7Z3Z3 882 aaKnown RBP14.38□□□□□ -0.11
ATG4B-216ENST00000475195 OR6N1Q8NGY5 312 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 MOSPD2Q8NHP6 518 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 ZNF566Q969W8 418 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 C1QTNF6Q9BXI9 259 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 GRIP2Q9C0E4 1043 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 IL1RAPQ9NPH3 570 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 B3GAT2Q9NPZ5 323 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 GLTPQ9NZD2 209 aa14.38□□□□□ -0.11
ATG4B-216ENST00000475195 PRPF19Q9UMS4 504 aaKnown RBP14.38□□□□□ -0.11
ATG4B-216ENST00000475195 A0A096LPE4 126 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 A0A1W2PPZ6 126 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 A0A1W2PRG6 482 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 CLOCKO15516 846 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 IGKV3-15P01624 115 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 IGLV1-44P01699 117 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 CSNK1A1P48729 337 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 MS4A2Q01362 244 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 FOXD4Q12950 439 aaPredicted RBP14.37□□□□□ -0.11
ATG4B-216ENST00000475195 TAF11Q15544 211 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 PODNL1Q6PEZ8 512 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 CDK20Q8IZL9 346 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 KBTBD8Q8NFY9 601 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 ASB10Q8WXI3 467 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms