RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ACVR1BP36896 505 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 BIDP55957 195 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 CHRNB3Q05901 458 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 TNK1Q13470 666 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 CAMK2DQ13557 499 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 C11orf71Q6IPW1 123 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 C8orf82Q6P1X6 216 aaPredicted RBP9.74□□□□□ -0.85
CKS1B-206ENST00000474215 HACD2Q6Y1H2 254 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 SLC35D2Q76EJ3 337 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 ZNF627Q7L945 461 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 NKAIN4Q8IVV8 208 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 WDFY1Q8IWB7 410 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 OR6X1Q8NH79 312 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 TMEM255BQ8WV15 326 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 TMEM239Q8WW34 195 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 CMTM5Q96DZ9 223 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 ADAD1Q96M93 576 aaKnown RBP9.74□□□□□ -0.85
CKS1B-206ENST00000474215 HS6ST2Q96MM7 605 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 KCNS3Q9BQ31 491 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 KATNB1Q9BVA0 655 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 CACNG6Q9BXT2 260 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 MYLK2Q9H1R3 596 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 GMPR2Q9P2T1 348 aaKnown RBP9.74□□□□□ -0.85
CKS1B-206ENST00000474215 GDF2Q9UK05 429 aaPredicted RBP9.74□□□□□ -0.85
CKS1B-206ENST00000474215 POFUT2Q9Y2G5 429 aa9.74□□□□□ -0.85
CKS1B-206ENST00000474215 GMNCA6NCL1 334 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 BLOC1S5-TXNDC5H3BN57 136 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 CXCR6O00574 342 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 NME4O00746 187 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 NDUFAB1O14561 156 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 GSTA4O15217 222 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 SEC14L2O76054 403 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 IGF2P01344 180 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 IGKV3-15P01624 115 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 HEXAP06865 529 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 CECR9P0C854 216 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 FUT1P19526 365 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 IFNA8P32881 189 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 ARR3P36575 388 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 CSNK1A1P48729 337 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 NUDT2P50583 147 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 SLC7A2P52569 658 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 NAAAQ02083 359 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 RAB35Q15286 201 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 Q71RC1 249 aaPredicted RBP9.73□□□□□ -0.85
CKS1B-206ENST00000474215 SLC46A3Q7Z3Q1 461 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 NANOGNBQ7Z5D8 188 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 CPLX4Q7Z7G2 160 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 TMEM54Q969K7 222 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 SLC25A44Q96H78 314 aaPredicted RBP9.73□□□□□ -0.85
CKS1B-206ENST00000474215 ULBP2Q9BZM5 246 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 FAM107BQ9H098 131 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 B3GNT2Q9NY97 397 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 MED31Q9Y3C7 131 aa9.73□□□□□ -0.85
CKS1B-206ENST00000474215 ZNF469Q96JG9 3925 aaPredicted RBP9.73□□□□□ -0.85
CKS1B-206ENST00000474215 USF3Q68DE3 2245 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 ZANQ9Y493 2812 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 HTR3EA5X5Y0 456 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 ZNF503-AS2A6NEH8 195 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 H7C417 338 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 SSX4O60224 188 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 SNX3O60493 162 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 OR7A10O76100 309 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 BCL10O95999 233 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 HLA-HP01893 362 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 IFNW1P05000 195 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 DRD4P21917 467 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 LSP1P33241 339 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 SERPINF1P36955 418 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 CAPZA2P47755 286 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 GSK3BP49841 420 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 IDH3GP51553 393 aaPredicted RBP9.72□□□□□ -0.85
CKS1B-206ENST00000474215 UGT2B15P54855 530 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 ST3GAL3Q11203 375 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 MST1LQ2TV78 715 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 LRFN4Q6PJG9 635 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 ZNF813Q6ZN06 617 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 DNM1P46Q6ZS02 220 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 PIWIL3Q7Z3Z3 882 aaKnown RBP9.72□□□□□ -0.85
CKS1B-206ENST00000474215 MDP1Q86V88 176 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 IL17RDQ8NFM7 739 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 OR4F15Q8NGB8 312 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 PFN4Q8NHR9 129 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 LIPHQ8WWY8 451 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 ZNF566Q969W8 418 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 SGTBQ96EQ0 304 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 REG4Q9BYZ8 158 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 SEC61A2Q9H9S3 476 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 CA10Q9NS85 328 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 C20orf141Q9NUB4 165 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 GLTPQ9NZD2 209 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 A4GNTQ9UNA3 340 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 SNX13Q9Y5W8 968 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 PMF1-BGLAPU3KQ54 211 aa9.72□□□□□ -0.85
CKS1B-206ENST00000474215 C2CD3Q4AC94 2353 aa9.71□□□□□ -0.85
CKS1B-206ENST00000474215 A0A1W2PRG6 482 aa9.71□□□□□ -0.86
CKS1B-206ENST00000474215 RNF223E7ERA6 249 aa9.71□□□□□ -0.86
CKS1B-206ENST00000474215 ZNF682O95780 498 aa9.71□□□□□ -0.86
CKS1B-206ENST00000474215 F13BP05160 661 aa9.71□□□□□ -0.86
CKS1B-206ENST00000474215 CELA3BP08861 270 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms