RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	PLPPR1	Q8TBJ4	325 aa		3.16	□□□□□ -1.9
BBX-223	ENST00000473542	NDRG1	Q92597	394 aa	Known RBP	3.16	□□□□□ -1.9
BBX-223	ENST00000473542	CYYR1	Q96J86	154 aa		3.16	□□□□□ -1.9
BBX-223	ENST00000473542	ZIM3	Q96PE6	472 aa		3.16	□□□□□ -1.9
BBX-223	ENST00000473542	TMEM59	Q9BXS4	323 aa		3.16	□□□□□ -1.9
BBX-223	ENST00000473542	VPS37B	Q9H9H4	285 aa		3.16	□□□□□ -1.9
BBX-223	ENST00000473542	RAB20	Q9NX57	234 aa		3.16	□□□□□ -1.9
BBX-223	ENST00000473542	NUFIP1	Q9UHK0	495 aa	Known RBP	3.16	□□□□□ -1.9
BBX-223	ENST00000473542	GNPTG	Q9UJJ9	305 aa		3.16	□□□□□ -1.9
BBX-223	ENST00000473542	MEGF6	O75095	1541 aa		3.15	□□□□□ -1.9
BBX-223	ENST00000473542	ZNF646	O15015	1829 aa	Predicted RBP	3.15	□□□□□ -1.91
BBX-223	ENST00000473542	TRBV11-1	A0A0K0K1C0	115 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	ERVV-1	B6SEH8	477 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542		C9JVG2	144 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542		H0Y9J4	135 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	SGK1	O00141	431 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	ZNF861P	O60384	105 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	SLC2A5	P22732	501 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	CCNE1	P24864	410 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	FOXN2	P32314	431 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	NUDT1	P36639	197 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	RBMX	P38159	391 aa	Known RBP	3.15	□□□□□ -1.91
BBX-223	ENST00000473542	CSNK1D	P48730	415 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	ACLY	P53396	1101 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	SUB1	P53999	127 aa	Known RBP eCLIP	3.15	□□□□□ -1.91
BBX-223	ENST00000473542	GPX6	P59796	221 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	CCNA1	P78396	465 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	ENPEP	Q07075	957 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	CUL2	Q13617	745 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	ZNF630	Q2M218	657 aa	Predicted RBP	3.15	□□□□□ -1.91
BBX-223	ENST00000473542	LRRC10	Q5BKY1	277 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	TMEM255A	Q5JRV8	349 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	CERS6	Q6ZMG9	384 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	CCDC73	Q6ZRK6	1079 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	LHFPL3	Q86UP9	236 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	TTC5	Q8N0Z6	440 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	ZADH2	Q8N4Q0	377 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	B3GNT7	Q8NFL0	401 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	OR2G3	Q8NGZ4	309 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	FANK1	Q8TC84	345 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	MCOLN3	Q8TDD5	553 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	BLOC1S5	Q8TDH9	187 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	ELMO1	Q92556	727 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	SLC38A4	Q969I6	547 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	ZNF578	Q96N58	590 aa	Predicted RBP	3.15	□□□□□ -1.91
BBX-223	ENST00000473542	SH3GL3	Q99963	347 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	ECSIT	Q9BQ95	431 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	CENPK	Q9BS16	269 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	RACGAP1	Q9H0H5	632 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	RPS6KB2	Q9UBS0	482 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	ZNF225	Q9UK10	706 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	PACSIN2	Q9UNF0	486 aa	Predicted RBP	3.15	□□□□□ -1.91
BBX-223	ENST00000473542	CELA1	Q9UNI1	258 aa		3.15	□□□□□ -1.91
BBX-223	ENST00000473542	USP47	Q96K76	1375 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	3.14	□□□□□ -1.91
BBX-223	ENST00000473542		A0A0G2JLM5	398 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	WI2-2373I1.2	A0A1W2PRP0	233 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	SMCO3	A2RU48	225 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	PINLYP	A6NC86	204 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	TCP11X1	B4DZS4	312 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	PEX7	O00628	323 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	GOSR2	O14653	212 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	EIF3G	O75821	320 aa	Known RBP eCLIP	3.14	□□□□□ -1.91
BBX-223	ENST00000473542	INS	P01308	110 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	GKN3P	P0CG01	181 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	NR2C1	P13056	603 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	RORA	P35398	523 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	SSR4	P51571	173 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	CDH6	P55285	790 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	PAGE3	Q5JUK9	113 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	PRAMEF20	Q5VT98	475 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	LRRC66	Q68CR7	880 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	ACP7	Q6ZNF0	438 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	CAMK2N1	Q7Z7J9	78 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	TMEM61	Q8N0U2	210 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	3.14	□□□□□ -1.91
BBX-223	ENST00000473542	OR4F15	Q8NGB8	312 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	ZNF414	Q96IQ9	312 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	FAM210B	Q96KR6	192 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	OR2M2	Q96R28	347 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	TGS1	Q96RS0	853 aa	Known RBP	3.14	□□□□□ -1.91
BBX-223	ENST00000473542	CHP1	Q99653	195 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	NXF3	Q9H4D5	531 aa	Known RBP	3.14	□□□□□ -1.91
BBX-223	ENST00000473542	NEK6	Q9HC98	313 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	INPP5E	Q9NRR6	644 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	NYAP2	Q9P242	653 aa		3.14	□□□□□ -1.91
BBX-223	ENST00000473542	PHF3	Q92576	2039 aa	Known RBP	3.14	□□□□□ -1.91
BBX-223	ENST00000473542		A0A075B6Q4	140 aa		3.13	□□□□□ -1.91
BBX-223	ENST00000473542	TRAV39	A0A0B4J263	110 aa		3.13	□□□□□ -1.91
BBX-223	ENST00000473542		A0A0B4J2A0	478 aa		3.13	□□□□□ -1.91
BBX-223	ENST00000473542		A0A1B0GUA9	196 aa		3.13	□□□□□ -1.91
BBX-223	ENST00000473542	NKX2-6	A6NCS4	301 aa		3.13	□□□□□ -1.91
BBX-223	ENST00000473542		H3BNH8	94 aa		3.13	□□□□□ -1.91
BBX-223	ENST00000473542	MRPS12	O15235	138 aa	Known RBP	3.13	□□□□□ -1.91
BBX-223	ENST00000473542	RNF13	O43567	381 aa		3.13	□□□□□ -1.91
BBX-223	ENST00000473542	TRAF3IP2	O43734	574 aa	Predicted RBP	3.13	□□□□□ -1.91
BBX-223	ENST00000473542	KLF8	O95600	359 aa	Predicted RBP	3.13	□□□□□ -1.91
BBX-223	ENST00000473542	ALDOB	P05062	364 aa		3.13	□□□□□ -1.91
BBX-223	ENST00000473542	PABPC4L	P0CB38	370 aa	Known RBP	3.13	□□□□□ -1.91
BBX-223	ENST00000473542	SMIM10L1	P0DMW3	83 aa		3.13	□□□□□ -1.91

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