RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 TPMTP51580 245 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 CRISP3P54108 245 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 UGT2B15P54855 530 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 PLP1P60201 277 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 ACTR3P61158 418 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 FZD2Q14332 565 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 RFX4Q33E94 735 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 Q6P435 159 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 KDM7AQ6ZMT4 941 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 H2AFVQ71UI9 128 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 PEX26Q7Z412 305 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 ARIH2OSQ8N7S6 290 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 Q8N9W7 124 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 SDR9C7Q8NEX9 313 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 OR9K2Q8NGE7 335 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 ACER1Q8TDN7 264 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 TPD52L3Q96J77 140 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 LINC00167Q96N53 147 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 ZNF285Q96NJ3 590 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 ECSITQ9BQ95 431 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 METTL7AQ9H8H3 244 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 DMAP1Q9NPF5 467 aaPredicted RBP2.45□□□□□ -2.02
PTCD3-209ENST00000472044 ZNF226Q9NYT6 803 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 SLC7A8Q9UHI5 535 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 TRAPPC4Q9Y296 219 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 PIKFYVEQ9Y2I7 2098 aa2.45□□□□□ -2.02
PTCD3-209ENST00000472044 ASTN1O14525 1302 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 A0A1W2PNU3 283 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-209ENST00000472044 XKRY2A2RUG3 117 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 ALDOBP05062 364 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 CRYGBP07316 175 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 CSF3P09919 207 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 GKN3PP0CG01 181 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 SMIM10L1P0DMW3 83 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 IGHV3-43DP0DP04 118 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 CASP14P31944 242 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 NMUP48645 174 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 SUB1P53999 127 aaKnown RBP eCLIP2.44□□□□□ -2.02
PTCD3-209ENST00000472044 FGF8P55075 233 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-209ENST00000472044 PSG5Q15238 335 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 SGCAQ16586 387 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 COA6Q5JTJ3 125 aaKnown RBP2.44□□□□□ -2.02
PTCD3-209ENST00000472044 Q6ZVH6 145 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 NANOGNBQ7Z5D8 188 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 THOC6Q86W42 341 aaKnown RBP2.44□□□□□ -2.02
PTCD3-209ENST00000472044 SLC2A14Q8TDB8 520 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 FAM104AQ969W3 186 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 LRRC58Q96CX6 371 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 ASB9Q96DX5 294 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 SMIM10Q96HG1 83 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 HSFY1Q96LI6 401 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 TMEM59Q9BXS4 323 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 ZFP14Q9HCL3 533 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 ETNK2Q9NVF9 386 aa2.44□□□□□ -2.02
PTCD3-209ENST00000472044 PACSIN2Q9UNF0 486 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-209ENST00000472044 IGKV1D-13A0A0B4J2D9 117 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 H3BNH8 94 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 PSTPIP1O43586 416 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 ERLIN2O94905 339 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 SNX4O95219 450 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 CST1P01037 141 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 CT62P0C5K7 136 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 IGKV1-13P0DP09 117 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 SLC2A5P22732 501 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 IFNA8P32881 189 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 ATP5C1P36542 298 aaKnown RBP2.43□□□□□ -2.02
PTCD3-209ENST00000472044 UCNP55089 124 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 KCNJ2P63252 427 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 IRX3P78415 501 aaPredicted RBP2.43□□□□□ -2.02
PTCD3-209ENST00000472044 PIGGQ5H8A4 983 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 VAX1Q5SQQ9 334 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 LCN12Q6JVE5 192 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 TAS2R42Q7RTR8 314 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 LHFPL3Q86UP9 236 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 OR2G2Q8NGZ5 317 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 DTX3LQ8TDB6 740 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 GIMAP1Q8WWP7 306 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 IL22RA2Q969J5 263 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 AURKBQ96GD4 344 aaPredicted RBP2.43□□□□□ -2.02
PTCD3-209ENST00000472044 SDHCQ99643 169 aaPredicted RBP2.43□□□□□ -2.02
PTCD3-209ENST00000472044 SH3GL3Q99963 347 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 CLMPQ9H6B4 373 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 TM9SF3Q9HD45 589 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 CTPS2Q9NRF8 586 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 KLHL28Q9NXS3 571 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 SLC2A8Q9NY64 477 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 GNPTGQ9UJJ9 305 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 RAB26Q9ULW5 256 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 WSB1Q9Y6I7 421 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 MSH6P52701 1360 aa2.43□□□□□ -2.02
PTCD3-209ENST00000472044 WDR62O43379 1518 aa2.42□□□□□ -2.02
PTCD3-209ENST00000472044 CARMIL3Q8ND23 1372 aa2.42□□□□□ -2.02
PTCD3-209ENST00000472044 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.42□□□□□ -2.02
PTCD3-209ENST00000472044 A0A1B0GVI7 797 aa2.42□□□□□ -2.02
PTCD3-209ENST00000472044 ZNF726A6NNF4 738 aa2.42□□□□□ -2.02
PTCD3-209ENST00000472044 UBXN8O00124 270 aa2.42□□□□□ -2.02
PTCD3-209ENST00000472044 XKRYO14609 159 aa2.42□□□□□ -2.02
PTCD3-209ENST00000472044 SOX15O60248 233 aa2.42□□□□□ -2.02
PTCD3-209ENST00000472044 SS18L1O75177 396 aaPredicted RBP2.42□□□□□ -2.02
PTCD3-209ENST00000472044 EIF3GO75821 320 aaKnown RBP eCLIP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms