RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 M0R082 166 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF500O60304 480 aaPredicted RBP5.82□□□□□ -1.48
HDAC1-204ENST00000471488 GLRA3O75311 464 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 LYPLA1O75608 230 aaPredicted RBP5.82□□□□□ -1.48
HDAC1-204ENST00000471488 UBL3O95164 117 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 IGHMP01871 453 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 CSF1P09603 554 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 TFPTP0C1Z6 253 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 CPA3P15088 417 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 PRPS1L1P21108 318 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 CASQ1P31415 396 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 P2RY4P51582 365 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 MAP2K6P52564 334 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 PCBP3P57721 371 aaKnown RBP5.82□□□□□ -1.48
HDAC1-204ENST00000471488 KRTAP10-3P60369 221 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 HOXC5Q00444 222 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 PLAURQ03405 335 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 SLC3A1Q07837 685 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 FUT5Q11128 374 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 FXNQ16595 210 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 SMU1Q2TAY7 513 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 DEFB112Q30KQ8 113 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 ESCO2Q56NI9 601 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF362Q5T0B9 420 aaPredicted RBP5.82□□□□□ -1.48
HDAC1-204ENST00000471488 WBP2NLQ6ICG8 309 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 Q6ZPA2 131 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 RHOUQ7L0Q8 258 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 RNF130Q86XS8 419 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 VRK2Q86Y07 508 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 UEVLDQ8IX04 471 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 CMIPQ8IY22 773 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 NATD1Q8N6N6 113 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 SYT14Q8NB59 555 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 OR1J1Q8NGS3 322 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 PSMA8Q8TAA3 256 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF417Q8TAU3 575 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 SGCDQ92629 289 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 TUBGCP3Q96CW5 907 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 SLC47A1Q96FL8 570 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 FCRL1Q96LA6 429 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 OXGR1Q96P68 337 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 OR2M2Q96R28 347 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 DIRC2Q96SL1 478 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF587Q96SQ5 575 aaPredicted RBP5.82□□□□□ -1.48
HDAC1-204ENST00000471488 FMO2Q99518 471 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 FOXB1Q99853 325 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 SH3GL3Q99963 347 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 SLC35A5Q9BS91 424 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 CHIAQ9BZP6 476 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 EGLN1Q9GZT9 426 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 PIF1Q9H611 641 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 NANOGQ9H9S0 305 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 NPHS2Q9NP85 383 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 POLE3Q9NRF9 147 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 ZDHHC18Q9NUE0 388 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 B3GNT2Q9NY97 397 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 C1RLQ9NZP8 487 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 ASH2LQ9UBL3 628 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 DCDC2Q9UHG0 476 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 EMCNQ9ULC0 261 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 DNAJC15Q9Y5T4 150 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 A0A1W2PPM1 405 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 CLDN34H7C241 214 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 AIM2O14862 343 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 ERLIN1O75477 346 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 NGFP01138 241 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 IGHV1-46P01743 117 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 PROCP04070 461 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 DBIP07108 87 aaKnown RBP5.81□□□□□ -1.48
HDAC1-204ENST00000471488 CHRNGP07510 517 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 G6PDP11413 515 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 PRG2P13727 222 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 SELEP16581 610 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 UQCRC2P22695 453 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 AHCYP23526 432 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 GRPRP30550 384 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 NME5P56597 212 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 NAA20P61599 178 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 RELBQ01201 579 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 PLP2Q04941 152 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 PMS2P3Q13401 168 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 HLXQ14774 488 aaPredicted RBP5.81□□□□□ -1.48
HDAC1-204ENST00000471488 OCLNQ16625 522 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 MOGQ16653 247 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 GSTA3Q16772 222 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 TBC1D28Q2M2D7 210 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 C2orf68Q2NKX9 166 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 MMEL1Q495T6 779 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 TTMPQ5BVD1 217 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 KANK2Q63ZY3 851 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 TMEM53Q6P2H8 277 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 BTNL3Q6UXE8 466 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF836Q6ZNA1 936 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 TIFABQ6ZNK6 161 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 LCA5Q86VQ0 697 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 SNX32Q86XE0 403 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 C10orf107Q8IVU9 208 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 PEX5LQ8IYB4 626 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF440Q8IYI8 595 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 PAQR4Q8N4S7 273 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms