RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 RNF170Q96K19 258 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 TCEAL2Q9H3H9 227 aaPredicted RBP8.06□□□□□ -1.12
HPS4-209ENST00000466781 ISYNA1Q9NPH2 558 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 C1GALT1Q9NS00 363 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 DHCR7Q9UBM7 475 aaKnown RBP8.06□□□□□ -1.12
HPS4-209ENST00000466781 ZNF705GA8MUZ8 300 aaPredicted RBP8.05□□□□□ -1.12
HPS4-209ENST00000466781 K7EPK0 472 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 GPR171O14626 319 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 DOK2O60496 412 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 GLULP15104 373 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 AADACP22760 399 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 CA5AP35218 305 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 SYPL1Q16563 259 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 ADAMTSL4Q6UY14 1074 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 SKA3Q8IX90 412 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 FAM71E2Q8N5Q1 922 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 ZDHHC16Q969W1 377 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 TRIB1Q96RU8 372 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 LHX3Q9UBR4 397 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 TEX51A0A1B0GUA7 166 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 A0A1B0GX78 115 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 DEGS1O15121 323 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 CD27P26842 260 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 SERPINF1P36955 418 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 ZMAT1Q5H9K5 638 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 ZNF439Q8NDP4 499 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 C11orf40Q8WZ69 217 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 KATNB1Q9BVA0 655 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 BARHL1Q9BZE3 327 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 WDR76Q9H967 626 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 FN3KRPQ9HA64 309 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 NDRG3Q9UGV2 375 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 PROCRQ9UNN8 238 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 PCYT1BQ9Y5K3 369 aaPredicted RBP8.05□□□□□ -1.12
HPS4-209ENST00000466781 PUS1Q9Y606 427 aaKnown RBP eCLIP8.05□□□□□ -1.12
HPS4-209ENST00000466781 M0R1B8 84 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 SNRNP70P08621 437 aaKnown RBP8.05□□□□□ -1.12
HPS4-209ENST00000466781 GRB2P62993 217 aaKnown RBP8.05□□□□□ -1.12
HPS4-209ENST00000466781 MC2RQ01718 297 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 TLE1Q04724 770 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 HIST2H3PS2Q5TEC6 136 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 SLC22A25Q6T423 547 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 MED25Q71SY5 747 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 CISD2Q8N5K1 135 aaKnown RBP8.05□□□□□ -1.12
HPS4-209ENST00000466781 ARFGAP1Q8N6T3 406 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 OR10X1Q8NGY0 326 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 RTP4Q96DX8 246 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 ERVMER34-1Q9H9K5 563 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 FGF21Q9NSA1 209 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 TXNL4BQ9NX01 149 aaKnown RBP8.05□□□□□ -1.12
HPS4-209ENST00000466781 BABAM2Q9NXR7 383 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 YBX2Q9Y2T7 364 aaKnown RBP8.05□□□□□ -1.12
HPS4-209ENST00000466781 HS3ST3A1Q9Y663 406 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 FAM183AA6NL82 134 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 UPK1BO75841 260 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 ZNF728P0DKX0 622 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 BMP2P12643 396 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 SSTR4P31391 388 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 ADRA1AP35348 466 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 GABRA4P48169 554 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 HYAL1Q12794 435 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 SLC35D2Q76EJ3 337 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 METTL4Q8N3J2 472 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 ABHD4Q8TB40 342 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 CDX2Q99626 313 aaPredicted RBP8.05□□□□□ -1.12
HPS4-209ENST00000466781 ABHD6Q9BV23 337 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 MFRPQ9BY79 579 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 CRISPLD2Q9H0B8 497 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 CLMPQ9H6B4 373 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 TMEM181Q9P2C4 612 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 NXPH3O95157 252 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 CRYBA1P05813 215 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 HTR2CP28335 458 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 CSN1S1P47710 185 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 GPLD1P80108 840 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 REEP5Q00765 189 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 C6orf89Q6UWU4 347 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 LRRC28Q86X40 367 aaPredicted RBP8.05□□□□□ -1.12
HPS4-209ENST00000466781 FAM185AQ8N0U4 392 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 C15orf54Q8N8G6 183 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 LIPHQ8WWY8 451 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 HRH4Q9H3N8 390 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 SDR39U1Q9NRG7 319 aaPredicted RBP8.05□□□□□ -1.12
HPS4-209ENST00000466781 NECAP2Q9NVZ3 263 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 MTCH1Q9NZJ7 389 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 CNOT2Q9NZN8 540 aaKnown RBP8.05□□□□□ -1.12
HPS4-209ENST00000466781 CD300AQ9UGN4 299 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 KIAA1551Q9HCM1 1747 aa8.05□□□□□ -1.12
HPS4-209ENST00000466781 SHANK3Q9BYB0 1731 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 PMS2P1A4D2B8 440 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 J3KTA2 159 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 AQP7O14520 342 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 BLVRBP30043 206 aaPredicted RBP8.04□□□□□ -1.12
HPS4-209ENST00000466781 AGFG1P52594 562 aaKnown RBP8.04□□□□□ -1.12
HPS4-209ENST00000466781 ZNF133P52736 654 aaPredicted RBP8.04□□□□□ -1.12
HPS4-209ENST00000466781 Q6ZTK2 550 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 OR1S2Q8NGQ3 325 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 CCDC74AQ96AQ1 378 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 DEFB127Q9H1M4 99 aa8.04□□□□□ -1.12
HPS4-209ENST00000466781 P2RY12Q9H244 342 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms