RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 NHLRC4P0CG21 123 aaPredicted RBP4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 HNRNPCL4P0DMR1 293 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 ME2P23368 584 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 TACR3P29371 465 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 UGT2B10P36537 528 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 CD79BP40259 229 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 APOBEC1P41238 236 aaKnown RBP4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 EIF1P41567 113 aaKnown RBP4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 SLC1A3P43003 542 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 P2RY4P51582 365 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 ARFIP2P53365 341 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 CRISP3P54108 245 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 RPS3AP61247 264 aaKnown RBP4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 H3F3AP84243 136 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 CDK6Q00534 326 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 LGALS3BPQ08380 585 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 FADDQ13158 208 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 SCARB2Q14108 478 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 SF3B4Q15427 424 aaKnown RBP eCLIP4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 DUSP7Q16829 419 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 EXOC3L2Q2M3D2 409 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 SYT14P1Q58G82 188 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 MTX3Q5HYI7 312 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF311Q5JNZ3 666 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 RNF220Q5VTB9 566 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF626Q68DY1 528 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 REP15Q6BDI9 236 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 ABLIM2Q6H8Q1 611 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 NANOGP8Q6NSW7 305 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 C3orf33Q6P1S2 294 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 STAC2Q6ZMT1 411 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF66Q6ZN08 573 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 TMPPEQ6ZT21 453 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 CHMP1BQ7LBR1 199 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 DHDDSQ86SQ9 333 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 ZBTB46Q86UZ6 589 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 SNX32Q86XE0 403 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 CALHM3Q86XJ0 350 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 RBM45Q8IUH3 476 aaKnown RBP4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 WDFY1Q8IWB7 410 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 GPR32P1Q8NGA4 272 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF563Q8TA94 476 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 C3orf49Q96BT1 292 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 ZC3HAV1LQ96H79 300 aaKnown RBP4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 GMPPAQ96IJ6 420 aaPredicted RBP4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 ZFP3Q96NJ6 502 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 ANKRD27Q96NW4 1050 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 CGREF1Q99674 301 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF559Q9BR84 538 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 PRRG4Q9BZD6 226 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 RABEP2Q9H5N1 569 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 KAT8Q9H7Z6 458 aaKnown RBP4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 NANOGQ9H9S0 305 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 BCL2L10Q9HD36 194 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 MED4Q9NPJ6 270 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 RASSF1Q9NS23 344 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 KLHL28Q9NXS3 571 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 KLHL13Q9P2N7 655 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 KCNN3Q9UGI6 736 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 CHRNA9Q9UGM1 479 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 LEF1Q9UJU2 399 aaPredicted RBP4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 MCTS1Q9ULC4 181 aaKnown RBP4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 TMED7Q9Y3B3 224 aa4.23□□□□□ -1.73
EXOSC3-204ENST00000465860 HEATR1Q9H583 2144 aaKnown RBP4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 ANK3Q12955 4377 aaKnown RBP4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 ARID1AO14497 2285 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 IGKV1D-42A0A075B6H8 117 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 TUBAL3A6NHL2 446 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 LIPT2A6NK58 231 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 CCT8L1PA6NM43 557 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 LRRN3E7EW58 273 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 M0QYG6 137 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 SULT2B1O00204 365 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 FAAHO00519 579 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 MRASO14807 208 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 ANGPT2O15123 496 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 CYTIPO60759 359 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 NPIPB7O75200 414 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 MFN2O95140 757 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 AKR7A3O95154 331 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 LYPD3O95274 346 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 SYNGR4O95473 234 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 PMS2P2O95744 297 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 PLAUP00749 431 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 IGHV3-9P01782 118 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 HRGP04196 525 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 TFPIP10646 304 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 ETS2P15036 469 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 NDUFB7P17568 137 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 TNFRSF1BP20333 461 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 SLC7A1P30825 629 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 SSTR2P30874 369 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 CPA2P48052 419 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 POLR2HP52434 150 aaKnown RBP4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 EEFSECP57772 596 aaKnown RBP4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 TXNL4AP83876 142 aaKnown RBP4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 HPCAP84074 193 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 SORDQ00796 357 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 RASGEF1BQ0VAM2 473 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 PIN1Q13526 163 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms