RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TRAM1Q15629 374 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 TAB1Q15750 504 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 TP53I3Q53FA7 332 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 PYDC2Q56P42 97 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 FAM27D1Q5T7N8 215 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 SLC35F2Q8IXU6 374 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 ZNF563Q8TA94 476 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 LIPHQ8WWY8 451 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 PSMF1Q92530 271 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 HIF3AQ9Y2N7 669 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 HTR3EA5X5Y0 456 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 TP53I11O14683 189 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 IDH3BO43837 385 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 SELENOFO60613 162 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 SC5DO75845 299 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 OR2T7P0C7T2 308 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 SDHBP21912 280 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 ACVR1BP36896 505 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 AQP2P41181 271 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 PTGDSP41222 190 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 CASP3P42574 277 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 LTBQ06643 244 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 SCN1BQ07699 218 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 SRSF6Q13247 344 aaKnown RBP13.11□□□□□ -0.31
COL5A1-205ENST00000464187 CBFBQ13951 182 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 TOMM34Q15785 309 aaPredicted RBP13.11□□□□□ -0.31
COL5A1-205ENST00000464187 COL28A1Q2UY09 1125 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 SLC35D3Q5M8T2 416 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 ACER2Q5QJU3 275 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 ATP1A1-AS1Q5TC04 95 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 MZT2AQ6P582 158 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 DND1Q8IYX4 353 aaKnown RBP13.11□□□□□ -0.31
COL5A1-205ENST00000464187 LRRC75AQ8NAA5 344 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 IL17RDQ8NFM7 739 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 OR2T27Q8NH04 317 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 FER1L6-AS2Q96M78 137 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 NEDD4LQ96PU5 975 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 HPF1Q9NWY4 346 aa13.11□□□□□ -0.31
COL5A1-205ENST00000464187 TEX13CA0A0J9YWL9 993 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 B4DXG7 233 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 BLOC1S5-TXNDC5H3BN57 136 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 MAGEB4O15481 346 aaPredicted RBP13.1□□□□□ -0.31
COL5A1-205ENST00000464187 SEC14L5O43304 696 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 PGCP20142 388 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 PYCR1P32322 319 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 EVX1P49640 407 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 TPTEP56180 551 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 ACTA2P62736 377 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 ACTG2P63267 376 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 AIMP2Q13155 320 aaKnown RBP13.1□□□□□ -0.31
COL5A1-205ENST00000464187 SELENBP1Q13228 472 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 ASAH1Q13510 395 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 CDONQ4KMG0 1287 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 ZNF468Q5VIY5 522 aaPredicted RBP13.1□□□□□ -0.31
COL5A1-205ENST00000464187 FAM122BQ7Z309 247 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 C10orf53Q8N6V4 93 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 CLEC1AQ8NC01 280 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 OR13C5Q8NGS8 318 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 ABHD4Q8TB40 342 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 CHAC2Q8WUX2 184 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 NXPE2Q96DL1 559 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 PELI1Q96FA3 418 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 Q96M85 177 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 PPP1R3EQ9H7J1 279 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 NANSQ9NR45 359 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 RYDENQ9NUL5 291 aaKnown RBP13.1□□□□□ -0.31
COL5A1-205ENST00000464187 MALT1Q9UDY8 824 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 KLK13Q9UKR3 277 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 COPS3Q9UNS2 423 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 WIF1Q9Y5W5 379 aa13.1□□□□□ -0.31
COL5A1-205ENST00000464187 ZFHX4Q86UP3 3567 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 LINC00854A0A1B0GVQ3 168 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 ASAH2BP0C7U1 165 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 APEX1P27695 318 aaKnown RBP13.09□□□□□ -0.31
COL5A1-205ENST00000464187 TACR3P29371 465 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 UQCRC1P31930 480 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 FOXC1Q12948 553 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 PON3Q15166 354 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 P2RY14Q15391 338 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 PRAMEF20Q5VT98 475 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 HBMQ6B0K9 141 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 JMJD6Q6NYC1 403 aaPredicted RBP13.09□□□□□ -0.31
COL5A1-205ENST00000464187 LEG1Q6P5S2 330 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 METAP1DQ6UB28 335 aaPredicted RBP13.09□□□□□ -0.31
COL5A1-205ENST00000464187 LYPD4Q6UWN0 246 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 CEACAM19Q7Z692 300 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 PXKQ7Z7A4 578 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 SYS1Q8N2H4 156 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 ZBTB8BQ8NAP8 495 aaPredicted RBP13.09□□□□□ -0.31
COL5A1-205ENST00000464187 GPR119Q8TDV5 335 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 KTI12Q96EK9 354 aaPredicted RBP13.09□□□□□ -0.31
COL5A1-205ENST00000464187 ADAM19Q9H013 955 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 CCDC86Q9H6F5 360 aaKnown RBP13.09□□□□□ -0.31
COL5A1-205ENST00000464187 C12orf10Q9HB07 376 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 ANKRD10Q9NXR5 420 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 PPP4R1LQ9P1A2 415 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 SLC6A5Q9Y345 797 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 CFAP47Q6ZTR5 3102 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 A0A1W2PRG6 482 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 OGG1O15527 345 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms