RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 PLPP2O43688 288 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 EIF4E2O60573 245 aaKnown RBP7.95□□□□□ -1.14
SHQ1-203ENST00000463369 GP1BAP07359 652 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 ELFN1P0C7U0 828 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 UBBP0CG47 229 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 UBCP0CG48 685 aaKnown RBP7.95□□□□□ -1.14
SHQ1-203ENST00000463369 MPC1LP0DKB6 136 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 RPA2P15927 270 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 GABRG2P18507 467 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 ATF1P18846 271 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 H2BFSP57053 126 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 AP3S2P59780 193 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 RPS13P62277 151 aaKnown RBP7.95□□□□□ -1.14
SHQ1-203ENST00000463369 RPS27AP62979 156 aaKnown RBP7.95□□□□□ -1.14
SHQ1-203ENST00000463369 UBA52P62987 128 aaKnown RBP7.95□□□□□ -1.14
SHQ1-203ENST00000463369 STX4Q12846 297 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 MAPK14Q16539 360 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 MANEAQ5SRI9 462 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 PRAMEF13Q5VWM6 474 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 ELP2Q6IA86 826 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 ETFRF1Q6IPR1 90 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 FAM71E1Q6IPT2 247 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 TNFAIP8L2Q6P589 184 aaPredicted RBP7.95□□□□□ -1.14
SHQ1-203ENST00000463369 ZNF613Q6PF04 617 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 HSD11B1LQ7Z5J1 315 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 MEX3DQ86XN8 651 aaKnown RBP7.95□□□□□ -1.14
SHQ1-203ENST00000463369 VRK3Q8IV63 474 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 SPAG16Q8N0X2 631 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 ARMC10Q8N2F6 343 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 TMEM185AQ8NFB2 350 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 C16orf78Q8WTQ4 265 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 CORO2AQ92828 525 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 ART5Q96L15 291 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 MFFQ9GZY8 342 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 ENKD1Q9H0I2 346 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 CXorf36Q9H7Y0 433 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 NIT2Q9NQR4 276 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 SDHAF3Q9NRP4 125 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 KLHL9Q9P2J3 617 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 SERGEFQ9UGK8 458 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 SPAG17Q6Q759 2223 aa7.95□□□□□ -1.14
SHQ1-203ENST00000463369 TCRBV21S2A2A0A5A6 115 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 MEX3AA1L020 520 aaKnown RBP7.94□□□□□ -1.14
SHQ1-203ENST00000463369 DNPH1O43598 174 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 PLRG1O43660 514 aaKnown RBP7.94□□□□□ -1.14
SHQ1-203ENST00000463369 ONECUT2O95948 504 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 CH25HO95992 272 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 IGHV2-70P01814 119 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 GBAP04062 536 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 EPXP11678 715 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 SELLP14151 372 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 MGMTP16455 207 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 SPI1P17947 270 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 TBXA2RP21731 343 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 SPAM1P38567 509 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 PTGFRP43088 359 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 FNTBP49356 437 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 KRT33BQ14525 404 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 GUCA2BQ16661 112 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 CLEC12AQ5QGZ9 265 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 HES5Q5TA89 166 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 ARL9Q6T311 187 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 RFLNAQ6ZTI6 216 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 CXXC5Q7LFL8 322 aaKnown RBP7.94□□□□□ -1.14
SHQ1-203ENST00000463369 CACUL1Q86Y37 369 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 NKAIN4Q8IVV8 208 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 IZUMO1Q8IYV9 350 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 ABCA7Q8IZY2 2146 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 ACBD7Q8N6N7 88 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 SIRT6Q8N6T7 355 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 BBS1Q8NFJ9 593 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 EDAQ92838 391 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 SGK3Q96BR1 496 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 NEURL3Q96EH8 262 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 MS4A4EQ96PG1 132 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 FCRL4Q96PJ5 515 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 ZNF607Q96SK3 696 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 ZFYVE21Q9BQ24 234 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 TRIM36Q9NQ86 728 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 KLHL1Q9NR64 748 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 CENPMQ9NSP4 180 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 C2orf42Q9NWW7 574 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 ZDHHC3Q9NYG2 299 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 SIT1Q9Y3P8 196 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 TDRD6O60522 2096 aaKnown RBP7.94□□□□□ -1.14
SHQ1-203ENST00000463369 RAB19A4D1S5 217 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 EFCAB7A8K855 629 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 F5H5P2 479 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 GABARAPH6UMI1 98 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 RRP8O43159 456 aaKnown RBP7.94□□□□□ -1.14
SHQ1-203ENST00000463369 ZNF749O43361 778 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 LCMT2O60294 686 aaKnown RBP7.94□□□□□ -1.14
SHQ1-203ENST00000463369 KLHL18O94889 574 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 ATP1B1P05026 303 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 GSTP1P09211 210 aaKnown RBP7.94□□□□□ -1.14
SHQ1-203ENST00000463369 STARP49675 285 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 ART1P52961 327 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 SNRPEP62304 92 aaKnown RBP7.94□□□□□ -1.14
SHQ1-203ENST00000463369 B4GALNT1Q00973 533 aa7.94□□□□□ -1.14
SHQ1-203ENST00000463369 TSPAN31Q12999 210 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms