RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 HIPK1Q86Z02 1210 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 POMGNT2Q8NAT1 580 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 OR6X1Q8NH79 312 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 ASB10Q8WXI3 467 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 STMN2Q93045 179 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 CENPNQ96H22 339 aaPredicted RBP10.41□□□□□ -0.74
CPNE1-221ENST00000462352 TSPAN32Q96QS1 320 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 GPX7Q96SL4 187 aaPredicted RBP10.41□□□□□ -0.74
CPNE1-221ENST00000462352 KATNB1Q9BVA0 655 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 POLDIP3Q9BY77 421 aaKnown RBP10.41□□□□□ -0.74
CPNE1-221ENST00000462352 LINC00470Q9BZP3 86 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 NDEL1Q9GZM8 345 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 TXNIPQ9H3M7 391 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 UPB1Q9UBR1 384 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 ZNF346Q9UL40 294 aaKnown RBP10.41□□□□□ -0.74
CPNE1-221ENST00000462352 CDH10Q9Y6N8 788 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 DOPEY2Q9Y3R5 2298 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 COL12A1Q99715 3063 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 UTP20O75691 2785 aaKnown RBP10.41□□□□□ -0.74
CPNE1-221ENST00000462352 PDLIM1O00151 329 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 KRT33AO76009 404 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 CD14P08571 375 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 ANXA8P13928 327 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 ZNF23P17027 643 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 IGHV1-2P23083 117 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 SLC6A6P31641 620 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 CCKARP32238 428 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 PCYT1AP49585 367 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 FOXG1P55316 489 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-221ENST00000462352 RPL27P61353 136 aaKnown RBP10.4□□□□□ -0.74
CPNE1-221ENST00000462352 ERVK-25P63136 954 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 RUNX1T1Q06455 604 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 COX10Q12887 443 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 ITGADQ13349 1161 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 P2RY6Q15077 328 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 PHYHD1Q5SRE7 291 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 ARMC4Q5T2S8 1044 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 ANKRD34AQ69YU3 496 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 CD300LDQ6UXZ3 194 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 DPY19L2P2Q6ZN68 376 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 HDDC2Q7Z4H3 204 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 KIF18BQ86Y91 864 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 ZDHHC13Q8IUH4 622 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 C20orf196Q8IYI0 205 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 SVOPLQ8N434 492 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 ZNF566Q969W8 418 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 SLC25A44Q96H78 314 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-221ENST00000462352 LRR1Q96L50 414 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 SAMD8Q96LT4 415 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 ALKBH3Q96Q83 286 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-221ENST00000462352 PLA2G12AQ9BZM1 189 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 EGLN3Q9H6Z9 239 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 NRIP3Q9NQ35 241 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 ASB6Q9NWX5 421 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 ADAM18Q9Y3Q7 739 aa10.4□□□□□ -0.74
CPNE1-221ENST00000462352 HCFC1P51610 2035 aa10.4□□□□□ -0.75
CPNE1-221ENST00000462352 ICE1Q9Y2F5 2266 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 SAC3D1A6NKF1 404 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 ZNF587BE7ETH6 402 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 G3V2T6 193 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 C16orf97H3BN30 126 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 M0R3G1 203 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 TRMUO75648 421 aaKnown RBP10.39□□□□□ -0.75
CPNE1-221ENST00000462352 LYZL6O75951 148 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 PPP1R3DO95685 299 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 IGHG1P01857 330 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 TP53P04637 393 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-221ENST00000462352 ITGA5P08648 1049 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 IGFBP1P08833 259 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-221ENST00000462352 PGA4P0DJD7 388 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 PGA3P0DJD8 388 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 ACADSP16219 412 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 IGFBP2P18065 325 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 PSMB1P20618 241 aaKnown RBP10.39□□□□□ -0.75
CPNE1-221ENST00000462352 COX5AP20674 150 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 UGT2B10P36537 528 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 ACVR1BP36896 505 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 CSNK1A1P48729 337 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 SORDQ00796 357 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 SNTB1Q13884 538 aaKnown RBP10.39□□□□□ -0.75
CPNE1-221ENST00000462352 TSC22D1Q15714 1073 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 SFRP5Q5T4F7 317 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 C9orf135Q5VTT2 229 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 RPL13AP3Q6NVV1 102 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 FAHD1Q6P587 224 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 KLHL17Q6TDP4 642 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 LINGO2Q7L985 606 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 FAM122BQ7Z309 247 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 ABHD12BQ7Z5M8 362 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-221ENST00000462352 GPR137CQ8N3F9 429 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 CLDN22Q8N7P3 220 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 ARIH2OSQ8N7S6 290 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 ATG16L2Q8NAA4 619 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 ACBD4Q8NC06 268 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 ICA1LQ8NDH6 482 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 OR8D4Q8NGM9 314 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 OR6N1Q8NGY5 312 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 ZNF519Q8TB69 540 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 TMEM54Q969K7 222 aa10.39□□□□□ -0.75
CPNE1-221ENST00000462352 Q96M85 177 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms