RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 ARPC4-TTLL3A0A0A6YYG9 625 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 SLC35F4A4IF30 521 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 HTR3EA5X5Y0 456 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 KPNA4O00629 521 aaPredicted RBP16.06■□□□□ 0.16
COL9A2-205ENST00000461118 DCTN3O75935 186 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 OR6A2O95222 327 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 HIST1H2ABP04908 130 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 SOD3P08294 240 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 AHCYP23526 432 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 RPS4XP62701 263 aaKnown RBP16.06■□□□□ 0.16
COL9A2-205ENST00000461118 ST3GAL3Q11203 375 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 TBRG1Q3YBR2 411 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 HIST3H2AQ7L7L0 130 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 SLC46A3Q7Z3Q1 461 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 VTCN1Q7Z7D3 282 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 GPR137CQ8N3F9 429 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 SMAP2Q8WU79 429 aaPredicted RBP16.06■□□□□ 0.16
COL9A2-205ENST00000461118 TMEM255BQ8WV15 326 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 TMEM239Q8WW34 195 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 NEUROG1Q92886 237 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 HIST1H2ACQ93077 130 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 PRRC1Q96M27 445 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 EMC6Q9BV81 110 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 REG4Q9BYZ8 158 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 CRLF2Q9HC73 371 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 MED29Q9NX70 200 aa16.06■□□□□ 0.16
COL9A2-205ENST00000461118 CISD1Q9NZ45 108 aaKnown RBP16.06■□□□□ 0.16
COL9A2-205ENST00000461118 NBEAL1Q6ZS30 2694 aa16.05■□□□□ 0.16
COL9A2-205ENST00000461118 RNF212BA8MTL3 300 aa16.05■□□□□ 0.16
COL9A2-205ENST00000461118 IFNW1P05000 195 aa16.05■□□□□ 0.16
COL9A2-205ENST00000461118 IFNA8P32881 189 aa16.05■□□□□ 0.16
COL9A2-205ENST00000461118 UGT2B15P54855 530 aa16.05■□□□□ 0.16
COL9A2-205ENST00000461118 ARF1P84077 181 aaKnown RBP16.05■□□□□ 0.16
COL9A2-205ENST00000461118 KLHL24Q6TFL4 600 aa16.05■□□□□ 0.16
COL9A2-205ENST00000461118 HIPK1Q86Z02 1210 aa16.05■□□□□ 0.16
COL9A2-205ENST00000461118 GEMIN6Q8WXD5 167 aaKnown RBP16.05■□□□□ 0.16
COL9A2-205ENST00000461118 ZNF837Q96EG3 531 aaPredicted RBP16.05■□□□□ 0.16
COL9A2-205ENST00000461118 ADAD1Q96M93 576 aaKnown RBP16.05■□□□□ 0.16
COL9A2-205ENST00000461118 C1QTNF6Q9BXI9 259 aa16.05■□□□□ 0.16
COL9A2-205ENST00000461118 GRIP2Q9C0E4 1043 aa16.05■□□□□ 0.16
COL9A2-205ENST00000461118 NELFAQ9H3P2 528 aa16.05■□□□□ 0.16
COL9A2-205ENST00000461118 MOV10Q9HCE1 1003 aaKnown RBP16.05■□□□□ 0.16
COL9A2-205ENST00000461118 ZNF726A6NNF4 738 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 M0R1B8 84 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 ZNF682O95780 498 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 SERPINA1P01009 418 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 TSPAN19P0C672 248 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 FUT1P19526 365 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 CEACAM16Q2WEN9 425 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 PGGHGQ32M88 737 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 C3orf36Q3SXR2 165 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 IFI44LQ53G44 452 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 PHYHD1Q5SRE7 291 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 SLC35D2Q76EJ3 337 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 WDFY1Q8IWB7 410 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 PIAS4Q8N2W9 510 aaPredicted RBP16.04■□□□□ 0.16
COL9A2-205ENST00000461118 FAM169BQ8N8A8 192 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 OR6X1Q8NH79 312 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 PFN4Q8NHR9 129 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 CCT8L2Q96SF2 557 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 C20orf141Q9NUB4 165 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 ARL8BQ9NVJ2 186 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 TAGLN3Q9UI15 199 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 MED31Q9Y3C7 131 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 SNX13Q9Y5W8 968 aa16.04■□□□□ 0.16
COL9A2-205ENST00000461118 ZNF99A8MXY4 864 aaPredicted RBP16.03■□□□□ 0.16
COL9A2-205ENST00000461118 C11orf98E9PRG8 122 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 M0R3G1 203 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 FFAR1O14842 300 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 CD5LO43866 347 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 OR7A10O76100 309 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 UMPSP11172 480 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 IFNGR1P15260 489 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 ACVR1BP36896 505 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 UBE2NP61088 152 aaKnown RBP16.03■□□□□ 0.16
COL9A2-205ENST00000461118 CAMK2DQ13557 499 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 ETFDHQ16134 617 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 FXNQ16595 210 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 GLYATQ6IB77 296 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 PODNL1Q6PEZ8 512 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 SLC22A25Q6T423 547 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 FKBP9P1Q75LS8 142 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 ZNF627Q7L945 461 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 NANOGNBQ7Z5D8 188 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 CCDC36Q8IYA8 594 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 OFCC1Q8IZS5 231 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 DEPDC4Q8N2C3 294 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 FAM162AQ96A26 154 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 SGTBQ96EQ0 304 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 HSH2DQ96JZ2 352 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 B3GAT2Q9NPZ5 323 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 MAN2C1Q9NTJ4 1040 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 ADA2Q9NZK5 511 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 CRNNQ9UBG3 495 aaPredicted RBP16.03■□□□□ 0.16
COL9A2-205ENST00000461118 RPS6KA6Q9UK32 745 aa16.03■□□□□ 0.16
COL9A2-205ENST00000461118 E7EQL1 145 aa16.02■□□□□ 0.16
COL9A2-205ENST00000461118 BLOC1S5-TXNDC5H3BN57 136 aa16.02■□□□□ 0.16
COL9A2-205ENST00000461118 RNF13O43567 381 aa16.02■□□□□ 0.16
COL9A2-205ENST00000461118 TLX2O43763 284 aaPredicted RBP16.02■□□□□ 0.16
COL9A2-205ENST00000461118 NDUFS7O75251 213 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms