RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 TIMM29Q9BSF4 260 aa2.78□□□□□ -1.96
VPS8-215ENST00000460158 KIR3DX1Q9H7L2 352 aa2.78□□□□□ -1.96
VPS8-215ENST00000460158 WDR54Q9H977 334 aa2.78□□□□□ -1.96
VPS8-215ENST00000460158 NMRAL1Q9HBL8 299 aa2.78□□□□□ -1.96
VPS8-215ENST00000460158 SAMSN1Q9NSI8 373 aaKnown RBP2.78□□□□□ -1.96
VPS8-215ENST00000460158 NECAP2Q9NVZ3 263 aa2.78□□□□□ -1.96
VPS8-215ENST00000460158 GPR83Q9NYM4 423 aa2.78□□□□□ -1.96
VPS8-215ENST00000460158 IL36GQ9NZH8 169 aa2.78□□□□□ -1.96
VPS8-215ENST00000460158 NUDT4Q9NZJ9 180 aa2.78□□□□□ -1.96
VPS8-215ENST00000460158 KLRF1Q9NZS2 232 aa2.78□□□□□ -1.96
VPS8-215ENST00000460158 NXT1Q9UKK6 140 aaKnown RBP2.78□□□□□ -1.96
VPS8-215ENST00000460158 CLEC4EQ9ULY5 219 aa2.78□□□□□ -1.96
VPS8-215ENST00000460158 SPATA2Q9UM82 520 aa2.78□□□□□ -1.96
VPS8-215ENST00000460158 WIPI2Q9Y4P8 454 aa2.78□□□□□ -1.96
VPS8-215ENST00000460158 ALG6Q9Y672 507 aa2.78□□□□□ -1.96
VPS8-215ENST00000460158 CDH10Q9Y6N8 788 aa2.78□□□□□ -1.96
VPS8-215ENST00000460158 SCRIBQ14160 1630 aa2.78□□□□□ -1.96
VPS8-215ENST00000460158 MAP3K5Q99683 1374 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 JCADQ9P266 1359 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 ELP1O95163 1332 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 PBRM1Q86U86 1689 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 NPIPA5A0A0B4J1W7 369 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 A0A0J9YWU9 116 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 A0A1B0GU03 582 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 A0A1W2PRF3 423 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 A0A1W2PRM7 423 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 NKX6-3A6NJ46 265 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 NPIPA5E9PKD4 350 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 F8VP50 259 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 K7EQD1 137 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 SIRPB1O00241 398 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 SOCS3O14543 225 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 B4GALT5O43286 388 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 IDH3BO43837 385 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 ADAP1O75689 374 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 ZMPSTE24O75844 475 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 SC5DO75845 299 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 ATP5LO75964 103 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 B3GAT3O94766 335 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 LYPLA2O95372 231 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 TNFAIP8O95379 198 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 F10P00742 488 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 HLA-HP01893 362 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 IGF1P05019 195 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 RPS17P08708 135 aaKnown RBP2.77□□□□□ -1.97
VPS8-215ENST00000460158 KRT16P08779 473 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 H2BFMP0C1H6 154 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 POLR2EP19388 210 aaKnown RBP2.77□□□□□ -1.97
VPS8-215ENST00000460158 C4BPBP20851 252 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 EDNRAP25101 427 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 GTF2H1P32780 548 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 MAS1LP35410 378 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 CSKP41240 450 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 MAP3K8P41279 467 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 RBM34P42696 430 aaKnown RBP2.77□□□□□ -1.97
VPS8-215ENST00000460158 MAGEA6P43360 314 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 RGRP47804 291 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 XKP51811 444 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 RAP1GDS1P52306 607 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 PLK1P53350 603 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 RAG2P55895 527 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 TMEM50BP56557 158 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 CXCR4P61073 352 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 ARF6P62330 175 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 OC90Q02509 493 aaPredicted RBP2.77□□□□□ -1.97
VPS8-215ENST00000460158 GPR50Q13585 617 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 MEF2DQ14814 521 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 ATXN7L3Q14CW9 347 aaPredicted RBP2.77□□□□□ -1.97
VPS8-215ENST00000460158 OR4D1Q15615 310 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 KCTD19Q17RG1 926 aaPredicted RBP2.77□□□□□ -1.97
VPS8-215ENST00000460158 COX19Q49B96 90 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 AKIRIN2Q53H80 203 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 ACTBL2Q562R1 376 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 MARCH8Q5T0T0 291 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 IDNKQ5T6J7 187 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 FAAP20Q6NZ36 180 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 ARMCX5Q6P1M9 558 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 ENPP6Q6UWR7 440 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 TMEM184AQ6ZMB5 413 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 GDPGP1Q6ZNW5 385 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 LANCL3Q6ZV70 420 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 RFPL4BQ6ZWI9 263 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 Q71RC1 249 aaPredicted RBP2.77□□□□□ -1.97
VPS8-215ENST00000460158 ABHD13Q7L211 337 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 NIPA1Q7RTP0 329 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 SSX6Q7RTT6 188 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 SMIM15Q7Z3B0 74 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 KCNMB4Q86W47 210 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 DND1Q8IYX4 353 aaKnown RBP2.77□□□□□ -1.97
VPS8-215ENST00000460158 LINC00518Q8N0U6 118 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 ELMOD1Q8N336 334 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 METTL4Q8N3J2 472 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 Q8NBF4 154 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 MAPK1IP1LQ8NDC0 245 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 ATP6V1C2Q8NEY4 427 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 OR4F6Q8NGB9 312 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 OR10A7Q8NGE5 316 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 OR8K1Q8NGG5 319 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 OR2L8Q8NGY9 312 aa2.77□□□□□ -1.97
VPS8-215ENST00000460158 OR52E5Q8NH55 327 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms