RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.17	□□□□□ -1.74
COL21A1-204	ENST00000456983	DOCK7	Q96N67	2140 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	IGKV1D-42	A0A075B6H8	117 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983		A0A087WUJ7	227 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	TRGV8	A0A0C4DH27	118 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983		A0A0J9YW62	118 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	TRBV4-1	A0A0J9YWV2	114 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	SAC3D1	A6NKF1	404 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	GJE1	A6NN92	205 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	CLCA1	A8K7I4	914 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	KDM4E	B2RXH2	506 aa	Predicted RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	LRRN3	E7EW58	273 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	TNFRSF11B	O00300	401 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	BCKDK	O14874	412 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	CXCL13	O43927	109 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	OR10H3	O60404	316 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	SLC19A2	O60779	497 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	SERPINI2	O75830	405 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	LYPD3	O95274	346 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	SYNGR4	O95473	234 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	BAG2	O95816	211 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	ACTL6A	O96019	429 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	SAG	P10523	405 aa	Predicted RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	FCGR1A	P12314	374 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	IFI30	P13284	250 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	ZNF708	P17019	499 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	ZNF23	P17027	643 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	FUT1	P19526	365 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	KLK2	P20151	261 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	GNLY	P22749	145 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	CHM	P24386	653 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	IDUA	P35475	653 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	APOBEC1	P41238	236 aa	Known RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	DIO1	P49895	249 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	CHN2	P52757	468 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	SUCLG1	P53597	346 aa	Known RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	CLDN18	P56856	261 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	OR2B6	P58173	313 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	ST3GAL3	Q11203	375 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	MYBPH	Q13203	477 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	SEC23B	Q15437	767 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	IGFBP7	Q16270	282 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	SGCB	Q16585	318 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	TMEM44	Q2T9K0	475 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	CTU2	Q2VPK5	515 aa	Known RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	TMEM176B	Q3YBM2	270 aa	Predicted RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	GLYR1	Q49A26	553 aa	Predicted RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	ACSF3	Q4G176	576 aa	Predicted RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	SOWAHC	Q53LP3	525 aa	Predicted RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	SLC25A53	Q5H9E4	307 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	C1orf140	Q5VVS0	124 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	OR2T5	Q6IEZ7	315 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	ZFP1	Q6P2D0	407 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	PODNL1	Q6PEZ8	512 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	ULK3	Q6PHR2	472 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	TTC33	Q6PID6	262 aa	Predicted RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	CHMP1B	Q7LBR1	199 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	P4HA3	Q7Z4N8	544 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	NANOGNB	Q7Z5D8	188 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	TSEN54	Q7Z6J9	526 aa	Known RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	AMIGO2	Q86SJ2	522 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	NRM	Q8IXM6	262 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	HS3ST5	Q8IZT8	346 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	GCNT2	Q8N0V5	402 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	RPRML	Q8N4K4	120 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	LSMEM1	Q8N8F7	131 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	AQP11	Q8NBQ7	271 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	OR13C2	Q8NGS9	318 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	OR2T29	Q8NH02	315 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	OR2V1	Q8NHB1	315 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	PIGX	Q8TBF5	258 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	FANK1	Q8TC84	345 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	TMEM239	Q8WW34	195 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	LRTOMT	Q8WZ04	291 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	SLC38A4	Q969I6	547 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	SDCCAG3	Q96C92	435 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	SLC25A36	Q96CQ1	311 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	ARL5B	Q96KC2	179 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	C7orf34	Q96L11	122 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	TRIB1	Q96RU8	372 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	ZNF347	Q96SE7	839 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	EPYC	Q99645	322 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	TUBA1C	Q9BQE3	449 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	POLR2J2	Q9GZM3	115 aa	Known RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	POLR2J3	Q9H1A7	115 aa	Known RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	SEMA6A	Q9H2E6	1030 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	YY1AP1	Q9H869	796 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	NMNAT1	Q9HAN9	279 aa	Predicted RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	ACKR4	Q9NPB9	350 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	C20orf141	Q9NUB4	165 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	KLHL13	Q9P2N7	655 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	SEC14L4	Q9UDX3	406 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	MED31	Q9Y3C7	131 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	AP4S1	Q9Y587	144 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	LYVE1	Q9Y5Y7	322 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	AP4B1	Q9Y6B7	739 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	HIVEP3	Q5T1R4	2406 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms