RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 IFITM5A6NNB3 132 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 EIF4E2O60573 245 aaKnown RBP16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 DHFRP00374 187 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 OR8G3PP0DMU2 310 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 FBLP22087 321 aaKnown RBP16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 ARL4DP49703 201 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 VWA2Q5GFL6 755 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 FAM199XQ6PEV8 388 aaPredicted RBP16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 CMTM4Q8IZR5 234 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 OR6V1Q8N148 313 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 TOMM5Q8N4H5 51 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 C7orf57Q8NEG2 295 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 OR2T4Q8NH00 348 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 ZNF671Q8TAW3 534 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 DPAGT1Q9H3H5 408 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 ZNF304Q9HCX3 659 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 MGAT4AQ9UM21 535 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 MRPS7Q9Y2R9 242 aaKnown RBP16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 TRAV6A0A075B6T7 132 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 LOC105371267A0A1B0GV96 52 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 C7orf66A4D0T2 115 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 C17orf51A8MQB3 221 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 ALG1L2C9J202 215 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 H7C1C5 153 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 AIPO00170 330 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 HCRTR2O43614 444 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 TMEM127O75204 238 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 HIST1H2ABP04908 130 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 FOLR1P15328 257 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 IL12BP29460 328 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 CSNK1EP49674 416 aaKnown RBP16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 NR0B1P51843 470 aaKnown RBP16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 AP2S1P53680 142 aaPredicted RBP16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 PER3P56645 1201 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 LCN6P62502 163 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 UBXN2BQ14CS0 331 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 LIPNQ5VXI9 398 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 HIST3H2AQ7L7L0 130 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 SLC38A6Q8IZM9 456 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 HIST1H2ACQ93077 130 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 SCMH1Q96GD3 660 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 GPR137Q96N19 417 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 SLC25A18Q9H1K4 315 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 MRPL39Q9NYK5 338 aaKnown RBP16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 STOMP27105 288 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 DPP4P27487 766 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 ALKBH1Q13686 389 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 HES5Q5TA89 166 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 EEF1A1P5Q5VTE0 462 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 PLXDC1Q8IUK5 500 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 DAZLQ92904 295 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 SLC41A2Q96JW4 573 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 WWTR1Q9GZV5 400 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 GHITMQ9H3K2 345 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 TAS2R5Q9NYW4 299 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 FRRS1LQ9P0K9 344 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 RABL2AQ9UBK7 228 aaPredicted RBP16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 RABL2BQ9UNT1 228 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 NUBP2Q9Y5Y2 271 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 TRAV36DV7A0A075B6V5 113 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 TVP23AA6NH52 213 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 SHOXO15266 292 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 NUDT21O43809 227 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 CDC40O60508 579 aaKnown RBP eCLIP16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 SLC22A5O76082 557 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 RPP14O95059 124 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 TCRBP04435 133 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 ADRB1P08588 477 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 CXCR1P25024 350 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 NSDHLQ15738 373 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 RNASE12Q5GAN4 147 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 TOR2AQ5JU69 321 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 C1QL3Q5VWW1 255 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 HLA-DQA1Q5Y7H0 255 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 FAM220AQ7Z4H9 259 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 ZNF441Q8N8Z8 693 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 SMIM4Q8WVI0 70 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 MNTQ99583 582 aa16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 ELF4Q99607 663 aaPredicted RBP16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 C7orf50Q9BRJ6 194 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 TSPAN10Q9H1Z9 355 aaPredicted RBP16.65■□□□□ 0.26
SEMA3B-209ENST00000456560 TRBV5-5A0A0J9YX44 114 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 ITGA10O75578 1167 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 AKR7A3O95154 331 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 WISP1O95388 367 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 RENP00797 406 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 CSF2RBP32927 897 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 KLF9Q13886 244 aaPredicted RBP16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 PRSS45Q7RTY3 260 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 OR8H3Q8N146 312 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 OR11H7Q8NGC8 314 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 OR1N1Q8NGS0 311 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 SLC25A38Q96DW6 304 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 OMA1Q96E52 524 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 FOXQ1Q9C009 403 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 RANBP3Q9H6Z4 567 aaPredicted RBP16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 WDR76Q9H967 626 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 EMC7Q9NPA0 242 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 NUDT15Q9NV35 164 aa16.64■□□□□ 0.25
SEMA3B-209ENST00000456560 ELF5Q9UKW6 265 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms