RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TRAM2Q15035 370 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 OR1Q1Q15612 314 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 KLHL12Q53G59 568 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 CLLU1Q5K131 121 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 ATP1A1-AS1Q5TC04 95 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 TEX261Q6UWH6 196 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 RTL4Q6ZR62 310 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 LUZP2Q86TE4 346 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 SLC38A6Q8IZM9 456 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 GALNT16Q8N428 558 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 TOR1AIP2Q8NFQ8 470 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 SNIP1Q8TAD8 396 aaKnown RBP14.37□□□□□ -0.11
SNX17-204ENST00000453453 TEX47Q8TBZ9 253 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 SLC7A13Q8TCU3 470 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 GNPDA2Q8TDQ7 276 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 SGCZQ96LD1 299 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 CCNL2Q96S94 520 aaPredicted RBP14.37□□□□□ -0.11
SNX17-204ENST00000453453 ARPC5LQ9BPX5 153 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 C7orf50Q9BRJ6 194 aaKnown RBP14.37□□□□□ -0.11
SNX17-204ENST00000453453 ANKRD19PQ9H560 264 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 SLC23A1Q9UHI7 598 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 EXOGQ9Y2C4 368 aaKnown RBP14.37□□□□□ -0.11
SNX17-204ENST00000453453 NUBP2Q9Y5Y2 271 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 U3KQ87 197 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 LIMS3P0CW19 117 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 LIMS4P0CW20 117 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 PLAURQ03405 335 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 ZNF117Q03924 483 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 C17orf67Q0P5P2 114 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 FOXD4Q12950 439 aaPredicted RBP14.37□□□□□ -0.11
SNX17-204ENST00000453453 SRSF6Q13247 344 aaKnown RBP14.37□□□□□ -0.11
SNX17-204ENST00000453453 SNTA1Q13424 505 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 SNAPC1Q16533 368 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 NDUFAF6Q330K2 333 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 B3GNTL1Q67FW5 361 aaPredicted RBP14.37□□□□□ -0.11
SNX17-204ENST00000453453 PODNL1Q6PEZ8 512 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 ZNF613Q6PF04 617 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 KLHL36Q8N4N3 616 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 OR8H1Q8NGG4 311 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 ZNF431Q8TF32 576 aaPredicted RBP14.37□□□□□ -0.11
SNX17-204ENST00000453453 PSMF1Q92530 271 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 SLC41A3Q96GZ6 507 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 TEX12Q9BXU0 123 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 KCNN2Q9H2S1 579 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 GALNT9Q9HCQ5 603 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 CYSLTR2Q9NS75 346 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 RABL2AQ9UBK7 228 aaPredicted RBP14.37□□□□□ -0.11
SNX17-204ENST00000453453 RABL2BQ9UNT1 228 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 PRELID1Q9Y255 219 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 PIEZO1Q92508 2521 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 GABRPO00591 440 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 CDK2AP1O14519 115 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 SEMA7AO75326 666 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 IFNA7P01567 189 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 IGHA1P01876 353 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 IGFBP1P08833 259 aaPredicted RBP14.36□□□□□ -0.11
SNX17-204ENST00000453453 PGCP20142 388 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 ITPKBP27987 946 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 HTR2AP28223 471 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 TALDO1P37837 337 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 ACAA2P42765 397 aaKnown RBP14.36□□□□□ -0.11
SNX17-204ENST00000453453 SLC1A3P43003 542 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 CYB561P49447 251 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 CBFBQ13951 182 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 P2RY14Q15391 338 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 TRAM1Q15629 374 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 ZNF57Q68EA5 555 aaPredicted RBP14.36□□□□□ -0.11
SNX17-204ENST00000453453 SLC30A6Q6NXT4 461 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 SLC27A4Q6P1M0 643 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 TMEM81Q6P7N7 255 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 GDF7Q7Z4P5 450 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 KIF18BQ86Y91 864 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 BEST3Q8N1M1 668 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 SYT14Q8NB59 555 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 OR4K5Q8NGD3 323 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 NEIL3Q8TAT5 605 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 RNF138Q8WVD3 245 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 TMEM203Q969S6 136 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 RFT1Q96AA3 541 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 CNIH4Q9P003 139 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 PPP4R1LQ9P1A2 415 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 NTNG1Q9Y2I2 539 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 CPAMD8Q8IZJ3 1885 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 WDFY3Q8IZQ1 3526 aa14.36□□□□□ -0.11
SNX17-204ENST00000453453 NUDT14O95848 222 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 MSX1P28360 303 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 P2RX1P51575 399 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 SOX8P57073 446 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 OC90Q02509 493 aaPredicted RBP14.35□□□□□ -0.11
SNX17-204ENST00000453453 HSF2Q03933 536 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 GPR176Q14439 515 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 SLC22A10Q63ZE4 541 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 HBMQ6B0K9 141 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 WBP2NLQ6ICG8 309 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 ACSM5Q6NUN0 579 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 RASSF6Q6ZTQ3 369 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 RRM2BQ7LG56 351 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 ZER1Q7Z7L7 766 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 LSM14AQ8ND56 463 aaKnown RBP14.35□□□□□ -0.11
SNX17-204ENST00000453453 ZNF680Q8NEM1 530 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms