RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 ZNF26P17031 533 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 EDNRAP25101 427 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 SLC6A6P31641 620 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 FXYD6P3P58550 94 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 CTXN1P60606 82 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 RPL27P61353 136 aaKnown RBP12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 COX10Q12887 443 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 MELKQ14680 651 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 ACKR1Q16570 336 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 TSPO2Q5TGU0 170 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 DPY19L2P2Q6ZN68 376 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 AMIGO2Q86SJ2 522 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 KIF18BQ86Y91 864 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 ZDHHC13Q8IUH4 622 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 UBE2J2Q8N2K1 259 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 OR52L1Q8NGH7 329 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 ZNF566Q969W8 418 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 GTPBP3Q969Y2 492 aaKnown RBP12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 SLC25A44Q96H78 314 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 TXNDC15Q96J42 360 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 LRR1Q96L50 414 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 KATNB1Q9BVA0 655 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 OSBPL10Q9BXB5 764 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 OR10A4Q9H209 315 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 OR52D1Q9H346 318 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 ZNF556Q9HAH1 456 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 B3GAT2Q9NPZ5 323 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 NRIP3Q9NQ35 241 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 NPDC1Q9NQX5 325 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 SLC7A10Q9NS82 523 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 ASB6Q9NWX5 421 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 UPB1Q9UBR1 384 aa12.88□□□□□ -0.35
TRAPPC12-211ENST00000452495 A6NIZ1 184 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 PRSS44E7EML9 344 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 ZNF587BE7ETH6 402 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 KRT33AO76009 404 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 CLDN1O95832 211 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 IGHG1P01857 330 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 PSMB1P20618 241 aaKnown RBP12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 RPS6KA3P51812 740 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 RAP1BP61224 184 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 RAP1AP62834 184 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 TOP3AQ13472 1001 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 RFX4Q33E94 735 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 ARMC4Q5T2S8 1044 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 GPR139Q6DWJ6 353 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 FAHD1Q6P587 224 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 THSD4Q6ZMP0 1018 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 FAM122BQ7Z309 247 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 IGFN1Q86VF2 1251 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 C20orf196Q8IYI0 205 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 HS3ST5Q8IZT8 346 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 GPR137CQ8N3F9 429 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 ATG16L2Q8NAA4 619 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 NOXO1Q8NFA2 376 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 ZNF519Q8TB69 540 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 FNDC8Q8TC99 324 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 MARVELD3Q96A59 401 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 ALKBH3Q96Q83 286 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 TSPAN32Q96QS1 320 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 PKP2Q99959 881 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 NIPSNAP1Q9BPW8 284 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 EMC6Q9BV81 110 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 TBC1D23Q9NUY8 699 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 TAS2R16Q9NYV7 291 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 IL20Q9NYY1 176 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 USP9YO00507 2555 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 ALPK2Q86TB3 2170 aa12.87□□□□□ -0.35
TRAPPC12-211ENST00000452495 ANKHD1Q8IWZ3 2542 aaKnown RBP12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 PDLIM1O00151 329 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 IGHV3-9P01782 118 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 PGA4P0DJD7 388 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 PGA3P0DJD8 388 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 ACADSP16219 412 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 IGFBP2P18065 325 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 SDHAP31040 664 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 CCKARP32238 428 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 UGT2B10P36537 528 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 CSNK1A1P48729 337 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 SH3BGRP55822 239 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 FAPQ12884 760 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 ITGADQ13349 1161 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 CAMK2DQ13557 499 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 STK11Q15831 433 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 KLHL17Q6TDP4 642 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 CXorf67Q86X51 503 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 PQLC1Q8N2U9 271 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 ICA1LQ8NDH6 482 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 C1orf162Q8NEQ5 155 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 OR6N1Q8NGY5 312 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 KISS1RQ969F8 398 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 ZNF570Q96NI8 536 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 PSMG3-AS1Q96PY0 264 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 USB1Q9BQ65 265 aaKnown RBP12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 HDHD5Q9BXW7 423 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 SEMA6AQ9H2E6 1030 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 EGLN3Q9H6Z9 239 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 SLC24A3Q9HC58 644 aa12.86□□□□□ -0.35
TRAPPC12-211ENST00000452495 GRHPRQ9UBQ7 328 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms