RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 PDLIM1O00151 329 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 BAG2O95816 211 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 BCL10O95999 233 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 IGHMP01871 453 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 ANXA8P13928 327 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 GSTM3P21266 225 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 DAPP51397 102 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 DAP3P51398 398 aaKnown RBP21.25■□□□□ 0.99
CPSF4-207ENST00000451876 RCN1Q15293 331 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 RFX4Q33E94 735 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 ARMC4Q5T2S8 1044 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 CD300LDQ6UXZ3 194 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 FAM122BQ7Z309 247 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 GABRG1Q8N1C3 465 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 UBE2J2Q8N2K1 259 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 ALKBH3Q96Q83 286 aaPredicted RBP21.25■□□□□ 0.99
CPSF4-207ENST00000451876 RBM24Q9BX46 236 aaKnown RBP21.25■□□□□ 0.99
CPSF4-207ENST00000451876 GABARAPL1Q9H0R8 117 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 SMURF2Q9HAU4 748 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 NRIP3Q9NQ35 241 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 IL20Q9NYY1 176 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 KIF17Q9P2E2 1029 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 REV1Q9UBZ9 1251 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 MALT1Q9UDY8 824 aa21.25■□□□□ 0.99
CPSF4-207ENST00000451876 ZNF346Q9UL40 294 aaKnown RBP21.25■□□□□ 0.99
CPSF4-207ENST00000451876 USP9YO00507 2555 aaPredicted RBP21.24■□□□□ 0.99
CPSF4-207ENST00000451876 NPIPB13A6NJU9 1138 aa21.24■□□□□ 0.99
CPSF4-207ENST00000451876 NPIPB4C9JG80 1138 aa21.24■□□□□ 0.99
CPSF4-207ENST00000451876 AKAP8O43823 692 aaKnown RBP21.24■□□□□ 0.99
CPSF4-207ENST00000451876 UPK3AO75631 287 aa21.24■□□□□ 0.99
CPSF4-207ENST00000451876 CD14P08571 375 aa21.24■□□□□ 0.99
CPSF4-207ENST00000451876 FOXG1P55316 489 aaPredicted RBP21.24■□□□□ 0.99
CPSF4-207ENST00000451876 FBXL19-AS1Q494R0 122 aa21.24■□□□□ 0.99
CPSF4-207ENST00000451876 PHYHD1Q5SRE7 291 aa21.24■□□□□ 0.99
CPSF4-207ENST00000451876 FBXW9Q5XUX1 488 aa21.24■□□□□ 0.99
CPSF4-207ENST00000451876 OR6X1Q8NH79 312 aa21.24■□□□□ 0.99
CPSF4-207ENST00000451876 ZNF726A6NNF4 738 aa21.23■□□□□ 0.99
CPSF4-207ENST00000451876 PPP1R3DO95685 299 aa21.23■□□□□ 0.99
CPSF4-207ENST00000451876 CLDN1O95832 211 aa21.23■□□□□ 0.99
CPSF4-207ENST00000451876 RPL27P61353 136 aaKnown RBP21.23■□□□□ 0.99
CPSF4-207ENST00000451876 TAF11Q15544 211 aa21.23■□□□□ 0.99
CPSF4-207ENST00000451876 CLEC12AQ5QGZ9 265 aa21.23■□□□□ 0.99
CPSF4-207ENST00000451876 Q6ZT83 130 aa21.23■□□□□ 0.99
CPSF4-207ENST00000451876 BEND4Q6ZU67 534 aa21.23■□□□□ 0.99
CPSF4-207ENST00000451876 LINGO2Q7L985 606 aa21.23■□□□□ 0.99
CPSF4-207ENST00000451876 Q96M85 177 aa21.23■□□□□ 0.99
CPSF4-207ENST00000451876 ADAD1Q96M93 576 aaKnown RBP21.23■□□□□ 0.99
CPSF4-207ENST00000451876 CIB1Q99828 191 aa21.23■□□□□ 0.99
CPSF4-207ENST00000451876 ZNF556Q9HAH1 456 aa21.23■□□□□ 0.99
CPSF4-207ENST00000451876 NPDC1Q9NQX5 325 aaPredicted RBP21.23■□□□□ 0.99
CPSF4-207ENST00000451876 FOXD3Q9UJU5 478 aaPredicted RBP21.23■□□□□ 0.99
CPSF4-207ENST00000451876 A1L4Q6 167 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 C19orf84I3L1E1 186 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 SLC43A1O75387 559 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 PGA4P0DJD7 388 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 PGA3P0DJD8 388 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 SLC6A6P31641 620 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 FAM27E3Q08E93 113 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 FAPQ12884 760 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 COX10Q12887 443 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 SLC36A3Q495N2 470 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 DPY19L2P2Q6ZN68 376 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 CLDN22Q8N7P3 220 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 ZNF519Q8TB69 540 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 SLC25A44Q96H78 314 aaPredicted RBP21.22■□□□□ 0.99
CPSF4-207ENST00000451876 ICE1Q9Y2F5 2266 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 ANPEPP15144 967 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 PPP2R2BQ00005 443 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 RPL13AP3Q6NVV1 102 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 RASD2Q96D21 266 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 IFT27Q9BW83 186 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 NDEL1Q9GZM8 345 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 GRHPRQ9UBQ7 328 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 UPB1Q9UBR1 384 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 IER3IP1Q9Y5U9 82 aa21.22■□□□□ 0.99
CPSF4-207ENST00000451876 TEX13CA0A0J9YWL9 993 aa21.21■□□□□ 0.99
CPSF4-207ENST00000451876 M0R3G1 203 aa21.21■□□□□ 0.99
CPSF4-207ENST00000451876 CNOT4O95628 575 aaKnown RBP21.21■□□□□ 0.99
CPSF4-207ENST00000451876 IGHV1-2P23083 117 aa21.21■□□□□ 0.99
CPSF4-207ENST00000451876 CCKARP32238 428 aa21.21■□□□□ 0.99
CPSF4-207ENST00000451876 ACVR1BP36896 505 aa21.21■□□□□ 0.99
CPSF4-207ENST00000451876 MESTQ5EB52 335 aa21.21■□□□□ 0.99
CPSF4-207ENST00000451876 CXorf67Q86X51 503 aaPredicted RBP21.21■□□□□ 0.99
CPSF4-207ENST00000451876 C20orf196Q8IYI0 205 aa21.21■□□□□ 0.99
CPSF4-207ENST00000451876 POMGNT2Q8NAT1 580 aa21.21■□□□□ 0.99
CPSF4-207ENST00000451876 OR52L1Q8NGH7 329 aa21.21■□□□□ 0.99
CPSF4-207ENST00000451876 HDAC2Q92769 488 aaKnown RBP21.21■□□□□ 0.99
CPSF4-207ENST00000451876 RNASE6Q93091 150 aaKnown RBP21.21■□□□□ 0.99
CPSF4-207ENST00000451876 ZNF566Q969W8 418 aa21.21■□□□□ 0.99
CPSF4-207ENST00000451876 ZNF570Q96NI8 536 aa21.21■□□□□ 0.99
CPSF4-207ENST00000451876 MRPL13Q9BYD1 178 aaKnown RBP21.21■□□□□ 0.99
CPSF4-207ENST00000451876 LINC00470Q9BZP3 86 aa21.21■□□□□ 0.99
CPSF4-207ENST00000451876 TBC1D23Q9NUY8 699 aa21.21■□□□□ 0.99
CPSF4-207ENST00000451876 ASB6Q9NWX5 421 aa21.21■□□□□ 0.99
CPSF4-207ENST00000451876 TMEFF2Q9UIK5 374 aaPredicted RBP21.21■□□□□ 0.99
CPSF4-207ENST00000451876 MITFO75030 526 aaPredicted RBP21.2■□□□□ 0.98
CPSF4-207ENST00000451876 TRMUO75648 421 aaKnown RBP21.2■□□□□ 0.98
CPSF4-207ENST00000451876 ACADSP16219 412 aa21.2■□□□□ 0.98
CPSF4-207ENST00000451876 SDHAP31040 664 aa21.2■□□□□ 0.98
CPSF4-207ENST00000451876 CD79BP40259 229 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms