RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 NR1H2P55055 460 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 ARF1P84077 181 aaKnown RBP13.79□□□□□ -0.2
TOP3B-211ENST00000449704 CHRNB3Q05901 458 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 TRAP1Q12931 704 aaKnown RBP13.79□□□□□ -0.2
TOP3B-211ENST00000449704 SEC23BQ15437 767 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 CEACAM16Q2WEN9 425 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 FAM98BQ52LJ0 330 aaKnown RBP13.79□□□□□ -0.2
TOP3B-211ENST00000449704 HIKESHIQ53FT3 197 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 ALG10Q5BKT4 473 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 KLHL24Q6TFL4 600 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 WDR31Q8NA23 367 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 OR4K5Q8NGD3 323 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 OR1K1Q8NGR3 316 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 OR13C2Q8NGS9 318 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 ZNF837Q96EG3 531 aaPredicted RBP13.79□□□□□ -0.2
TOP3B-211ENST00000449704 FAM46AQ96IP4 442 aaKnown RBP13.79□□□□□ -0.2
TOP3B-211ENST00000449704 LRR1Q96L50 414 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 ADAD1Q96M93 576 aaKnown RBP13.79□□□□□ -0.2
TOP3B-211ENST00000449704 TNFRSF13CQ96RJ3 184 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 C1QTNF6Q9BXI9 259 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 LIME1Q9H400 295 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 SLC17A5Q9NRA2 495 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 AURKCQ9UQB9 309 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 HIF3AQ9Y2N7 669 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 SLC25A15Q9Y619 301 aa13.79□□□□□ -0.2
TOP3B-211ENST00000449704 PRR14LQ5THK1 2151 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 A0A1W2PPR1 153 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 RPL36A-HNRNPH2H7BZ11 118 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 CDC42EP2O14613 210 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 GSC2O15499 205 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 LOXP28300 417 aaPredicted RBP13.78□□□□□ -0.2
TOP3B-211ENST00000449704 SLC9A3P48764 834 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 ZNF83P51522 516 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 TOP3AQ13472 1001 aaPredicted RBP13.78□□□□□ -0.2
TOP3B-211ENST00000449704 ACKR1Q16570 336 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 PGM2L1Q6PCE3 622 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 TMPRSS11FQ6ZWK6 438 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 SSX8Q7RTT4 187 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 PIWIL3Q7Z3Z3 882 aaKnown RBP13.78□□□□□ -0.2
TOP3B-211ENST00000449704 CDH24Q86UP0 819 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 IGFN1Q86VF2 1251 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 C17orf78Q8N4C9 275 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 BCL2L2Q92843 193 aaPredicted RBP13.78□□□□□ -0.2
TOP3B-211ENST00000449704 POP5Q969H6 163 aaKnown RBP13.78□□□□□ -0.2
TOP3B-211ENST00000449704 ZNF566Q969W8 418 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 SLC25A44Q96H78 314 aaPredicted RBP13.78□□□□□ -0.2
TOP3B-211ENST00000449704 ALPK1Q96QP1 1244 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 CADM1Q9BY67 442 aaKnown RBP13.78□□□□□ -0.2
TOP3B-211ENST00000449704 ULBP2Q9BZM5 246 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 ESRP2Q9H6T0 727 aaKnown RBP13.78□□□□□ -0.2
TOP3B-211ENST00000449704 MAGIXQ9H6Y5 334 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 PLEKHF2Q9H8W4 249 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 KRCC1Q9NPI7 259 aaPredicted RBP13.78□□□□□ -0.2
TOP3B-211ENST00000449704 TMCC3Q9ULS5 477 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 POFUT2Q9Y2G5 429 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 CREBBPQ92793 2442 aa13.78□□□□□ -0.2
TOP3B-211ENST00000449704 SH3PXD2BA1X283 911 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 DPRXA6NFQ7 191 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 PLAUP00749 431 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 CD3EP07766 207 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 TSPAN19P0C672 248 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 OMPP47874 163 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 LRBAP50851 2863 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 DAP3P51398 398 aaKnown RBP13.77□□□□□ -0.21
TOP3B-211ENST00000449704 SH3BGRP55822 239 aaPredicted RBP13.77□□□□□ -0.21
TOP3B-211ENST00000449704 CLRN1P58418 232 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 CTXN1P60606 82 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 PRPS1P60891 318 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 UBE2NP61088 152 aaKnown RBP13.77□□□□□ -0.21
TOP3B-211ENST00000449704 RUNX1T1Q06455 604 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 TBRG1Q3YBR2 411 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 ZBED5Q49AG3 693 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 NCMAPQ5T1S8 102 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 ANKRD16Q6P6B7 361 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 SEZ6L2Q6UXD5 910 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 SPATA24Q86W54 205 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 FUZQ9BT04 418 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 GLTPQ9NZD2 209 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 NPAP1Q9NZP6 1156 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 AMDHD2Q9Y303 409 aa13.77□□□□□ -0.21
TOP3B-211ENST00000449704 M0R1B8 84 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 TNFRSF11BO00300 401 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 OR10H3O60404 316 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 KRT36O76013 467 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 SEC14L2O76054 403 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 WNT11O96014 354 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 IGHG1P01857 330 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 RPL4P36578 427 aaKnown RBP13.76□□□□□ -0.21
TOP3B-211ENST00000449704 MAGEA2P43356 314 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 RPS4XP62701 263 aaKnown RBP13.76□□□□□ -0.21
TOP3B-211ENST00000449704 TUBA1BP68363 451 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 TUBA4AP68366 448 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 BSPH1Q075Z2 132 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 FHL1Q13642 323 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 FLOT2Q14254 428 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 ANKDD1AQ495B1 522 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 KLHL17Q6TDP4 642 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 ZNF704Q6ZNC4 412 aaPredicted RBP13.76□□□□□ -0.21
TOP3B-211ENST00000449704 TUBA1AQ71U36 451 aa13.76□□□□□ -0.21
TOP3B-211ENST00000449704 HDDC2Q7Z4H3 204 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms