RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 FAAP24Q9BTP7 215 aa9.85□□□□□ -0.83
LINC00342-202ENST00000448494 DPH1Q9BZG8 443 aa9.85□□□□□ -0.83
LINC00342-202ENST00000448494 ZNF236Q9UL36 1845 aa9.85□□□□□ -0.83
LINC00342-202ENST00000448494 LOC285556D6RIA3 1793 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 KIR2DL5BA0A0G2JN68 375 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 KIR2DL5BA0A0G2JPC4 375 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 TRBC2A0A5B9 178 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 AHRRA9YTQ3 701 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 FFAR1O14842 300 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 LRATO95237 230 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 PNPP00491 289 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 TK1P04183 234 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 MELTFP08582 738 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 HMGB2P26583 209 aaKnown RBP9.84□□□□□ -0.83
LINC00342-202ENST00000448494 TLX1P31314 330 aaPredicted RBP9.84□□□□□ -0.83
LINC00342-202ENST00000448494 SLC6A9P48067 706 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 PTH2RP49190 550 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 P2RX1P51575 399 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 SMIM11AP58511 58 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 FZD5Q13467 585 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 CAPSQ13938 189 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 CBFBQ13951 182 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 RPE65Q16518 533 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 SYPL1Q16563 259 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 C1orf194Q5T5A4 169 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 FAM27D1Q5T7N8 215 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 MPZL3Q6UWV2 235 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 DNM1P46Q6ZS02 220 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 KIR2DL5AQ8N109 375 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 FRMD1Q8N878 549 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 ZNF671Q8TAW3 534 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 CSGALNACT1Q8TDX6 532 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 KLHL5Q96PQ7 755 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 SLC25A51Q9H1U9 297 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 TRIM36Q9NQ86 728 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 CYTL1Q9NRR1 136 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 TAS2R8Q9NYW2 309 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 FBXW11Q9UKB1 542 aa9.84□□□□□ -0.83
LINC00342-202ENST00000448494 PUS1Q9Y606 427 aaKnown RBP eCLIP9.84□□□□□ -0.83
LINC00342-202ENST00000448494 GXYLT2A0PJZ3 443 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 ZNF705GA8MUZ8 300 aaPredicted RBP9.83□□□□□ -0.84
LINC00342-202ENST00000448494 PLRG1O43660 514 aaKnown RBP9.83□□□□□ -0.84
LINC00342-202ENST00000448494 PIAS2O75928 621 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 DTYMKP23919 212 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 HOXC8P31273 242 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 AFF3P51826 1226 aaKnown RBP9.83□□□□□ -0.84
LINC00342-202ENST00000448494 OR5I1Q13606 314 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 TTLL4Q14679 1199 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 RAB41Q5JT25 222 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 UBXN11Q5T124 520 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 KCTD9Q7L273 389 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 C16orf59Q7L2K0 433 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 GALNTL5Q7Z4T8 443 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 CACUL1Q86Y37 369 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 CLECL1Q8IZS7 167 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 GPC2Q8N158 579 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 OR4L1Q8NH43 312 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 LGALS14Q8TCE9 139 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 PPP1R1CQ8WVI7 109 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 FAM71F1Q96KD3 344 aaPredicted RBP9.83□□□□□ -0.84
LINC00342-202ENST00000448494 ORAI3Q9BRQ5 295 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 ACTRT3Q9BYD9 372 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 SRMSQ9H3Y6 488 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 TMEM38AQ9H6F2 299 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 IL21RQ9HBE5 538 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 UPB1Q9UBR1 384 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 SERGEFQ9UGK8 458 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 PARP14Q460N5 1801 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 A6NIZ1 184 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 DCTN6O00399 190 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 INSIG1O15503 277 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 FLRT2O43155 660 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 ZNF432O94892 652 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 H1F0P07305 194 aaKnown RBP9.83□□□□□ -0.84
LINC00342-202ENST00000448494 CST2P09228 141 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 HLA-GP17693 338 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 GJA4P35212 333 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 IGFALSP35858 605 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 CCR5P51681 352 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 CLDN12P56749 244 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 OR7A5Q15622 319 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 TCTN3Q6NUS6 607 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 TAS1R1Q7RTX1 841 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 NUP54Q7Z3B4 507 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 TMEM183AQ8IXX5 376 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 LINC00471Q8N535 108 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 OR4S1Q8NGB4 309 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 OR4K5Q8NGD3 323 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 THOC3Q96J01 351 aaKnown RBP9.83□□□□□ -0.84
LINC00342-202ENST00000448494 INSM2Q96T92 566 aaPredicted RBP9.83□□□□□ -0.84
LINC00342-202ENST00000448494 C20orf24Q9BUV8 137 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 OR8D2Q9GZM6 311 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.83□□□□□ -0.84
LINC00342-202ENST00000448494 ZNF282Q9UDV7 671 aaPredicted RBP9.83□□□□□ -0.84
LINC00342-202ENST00000448494 IL20RAQ9UHF4 553 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 SLC25A13Q9UJS0 675 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 OR52A1Q9UKL2 312 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 FOXJ3Q9UPW0 622 aa9.83□□□□□ -0.84
LINC00342-202ENST00000448494 PCYT1BQ9Y5K3 369 aaPredicted RBP9.83□□□□□ -0.84
LINC00342-202ENST00000448494 SIRT4Q9Y6E7 314 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms