RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 DAPP51397 102 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 BIDP55957 195 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 RPL27P61353 136 aaKnown RBP12.41□□□□□ -0.42
CTSS-202ENST00000448301 MELKQ14680 651 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 ARMC4Q5T2S8 1044 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 FAM205BPQ63HN1 556 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 ZNF474Q6S9Z5 364 aaPredicted RBP12.41□□□□□ -0.42
CTSS-202ENST00000448301 KLHL17Q6TDP4 642 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 DPY19L2P2Q6ZN68 376 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 BEND4Q6ZU67 534 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.41□□□□□ -0.42
CTSS-202ENST00000448301 FAM122BQ7Z309 247 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 POMGNT2Q8NAT1 580 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 LRRC46Q96FV0 321 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 SAMD8Q96LT4 415 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 TSPAN32Q96QS1 320 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 EMC6Q9BV81 110 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 KATNB1Q9BVA0 655 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 LINC00470Q9BZP3 86 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 ENKD1Q9H0I2 346 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 EGLN3Q9H6Z9 239 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 MALT1Q9UDY8 824 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 POFUT2Q9Y2G5 429 aa12.41□□□□□ -0.42
CTSS-202ENST00000448301 NKX2-6A6NCS4 301 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 CENPBD1B2RD01 187 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 H0YHG0 523 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 APEHP13798 732 aaKnown RBP12.4□□□□□ -0.42
CTSS-202ENST00000448301 ANPEPP15144 967 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 PCYT1AP49585 367 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 RPS6KA3P51812 740 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 PPP2R2BQ00005 443 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 TFF3Q07654 80 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 TSPO2Q5TGU0 170 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 FBXW9Q5XUX1 488 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 ANKRD34AQ69YU3 496 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 KDM4DQ6B0I6 523 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 Q6ZT83 130 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 WDFY1Q8IWB7 410 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 PARP8Q8N3A8 854 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 OR52L1Q8NGH7 329 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 SLC25A44Q96H78 314 aaPredicted RBP12.4□□□□□ -0.42
CTSS-202ENST00000448301 LRR1Q96L50 414 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 RBM4BQ9BQ04 359 aaKnown RBP12.4□□□□□ -0.42
CTSS-202ENST00000448301 RBM4Q9BWF3 364 aaKnown RBP12.4□□□□□ -0.42
CTSS-202ENST00000448301 RBM24Q9BX46 236 aaKnown RBP12.4□□□□□ -0.42
CTSS-202ENST00000448301 PLA2G12AQ9BZM1 189 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 DCLRE1BQ9H816 532 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 PAPOLBQ9NRJ5 636 aaKnown RBP12.4□□□□□ -0.42
CTSS-202ENST00000448301 SLC7A10Q9NS82 523 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 ELOVL5Q9NYP7 299 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 REV1Q9UBZ9 1251 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 IL20RAQ9UHF4 553 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 FOXD3Q9UJU5 478 aaPredicted RBP12.4□□□□□ -0.42
CTSS-202ENST00000448301 ZNF346Q9UL40 294 aaKnown RBP12.4□□□□□ -0.42
CTSS-202ENST00000448301 ADAM18Q9Y3Q7 739 aa12.4□□□□□ -0.42
CTSS-202ENST00000448301 A6NIZ1 184 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 PDLIM1O00151 329 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 IMPA2O14732 288 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 ARPC3O15145 178 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 SOX14O95416 240 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 TXNDC12O95881 172 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 IGHV3-9P01782 118 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 PGA4P0DJD7 388 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 PGA3P0DJD8 388 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 OSMP13725 252 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 ACADSP16219 412 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 SDHAP31040 664 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 RAP1BP61224 184 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 RAP1AP62834 184 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 ERVK-25P63136 954 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 TOP3AQ13472 1001 aaPredicted RBP12.39□□□□□ -0.43
CTSS-202ENST00000448301 CAMK2DQ13557 499 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 GPR139Q6DWJ6 353 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 C20orf196Q8IYI0 205 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 GABRG1Q8N1C3 465 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 UBE2J2Q8N2K1 259 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 ARIH2OSQ8N7S6 290 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 OR8D4Q8NGM9 314 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 ZNF519Q8TB69 540 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 RNASE6Q93091 150 aaKnown RBP12.39□□□□□ -0.43
CTSS-202ENST00000448301 ZNF566Q969W8 418 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 ZNF570Q96NI8 536 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 CIB1Q99828 191 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 C9orf16Q9BUW7 83 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 SMURF2Q9HAU4 748 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 KRT84Q9NSB2 600 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 TBC1D23Q9NUY8 699 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 GALNT8Q9NY28 637 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 USE1Q9NZ43 259 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 GRHPRQ9UBQ7 328 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 UPB1Q9UBR1 384 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 KLF2Q9Y5W3 355 aaPredicted RBP12.39□□□□□ -0.43
CTSS-202ENST00000448301 USP9XQ93008 2570 aaPredicted RBP12.39□□□□□ -0.43
CTSS-202ENST00000448301 HELZ2Q9BYK8 2649 aaKnown RBP12.39□□□□□ -0.43
CTSS-202ENST00000448301 DOPEY1Q5JWR5 2465 aa12.39□□□□□ -0.43
CTSS-202ENST00000448301 BHLHE40O14503 412 aa12.38□□□□□ -0.43
CTSS-202ENST00000448301 UPK3AO75631 287 aa12.38□□□□□ -0.43
CTSS-202ENST00000448301 TRMUO75648 421 aaKnown RBP12.38□□□□□ -0.43
CTSS-202ENST00000448301 PPP1R3DO95685 299 aa12.38□□□□□ -0.43
CTSS-202ENST00000448301 IGHG1P01857 330 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms