RNA–Protein interactions for RNA: ENST00000443203.5

NELFA-208, Transcript of negative elongation factor complex member A, human

TSL 4

Gene NELFA, Length 553 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFA-208	ENST00000443203	PDLIM1	O00151	329 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	TRAF3IP2	O43734	574 aa	Predicted RBP	12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	SLC43A1	O75387	559 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	TNFSF13	O75888	250 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	SMNDC1	O75940	238 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	CD8B	P10966	210 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	OSM	P13725	252 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	SSTR2	P30874	369 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	DAP	P51397	102 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	BID	P55957	195 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	FHL1	Q13642	323 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	TRIP10	Q15642	601 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	ACKR1	Q16570	336 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	SLC25A35	Q3KQZ1	300 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	FAM205BP	Q63HN1	556 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	NIPAL3	Q6P499	406 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	FAHD1	Q6P587	224 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	VWA1	Q6PCB0	445 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	KLHL17	Q6TDP4	642 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	CASP12	Q6UXS9	341 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	ZNF620	Q6ZNG0	422 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	NUFIP2	Q7Z417	695 aa	Known RBP	12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	BTLA	Q7Z6A9	289 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	IGFN1	Q86VF2	1251 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	ZIC4	Q8N9L1	334 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	LRRC75A	Q8NAA5	344 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	TEX47	Q8TBZ9	253 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	SAMD8	Q96LT4	415 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	GPX7	Q96SL4	187 aa	Predicted RBP	12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	CIB1	Q99828	191 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	KATNB1	Q9BVA0	655 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	IFT27	Q9BW83	186 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	TEX12	Q9BXU0	123 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	TXNIP	Q9H3M7	391 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	SMURF2	Q9HAU4	748 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	PLSCR4	Q9NRQ2	329 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	TBC1D23	Q9NUY8	699 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	MED29	Q9NX70	200 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	IL20	Q9NYY1	176 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	GRHPR	Q9UBQ7	328 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	UPB1	Q9UBR1	384 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	ITGB1BP2	Q9UKP3	347 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	ZNF346	Q9UL40	294 aa	Known RBP	12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	MED13L	Q71F56	2210 aa		12.5	□□□□□ -0.41
NELFA-208	ENST00000443203	SLC35F4	A4IF30	521 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203		A6NIZ1	184 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	NPIPB13	A6NJU9	1138 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	NPIPB4	C9JG80	1138 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	MSTN	O14793	375 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	KRT33A	O76009	404 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	CLDN14	O95500	239 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	IGHM	P01871	453 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	CDH2	P19022	906 aa	Predicted RBP	12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	IGFBP5	P24593	272 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	POU1F1	P28069	291 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	NOS3	P29474	1203 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	OR3A2	P47893	321 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	ALDH3A2	P51648	485 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	RAP1B	P61224	184 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	RPL27	P61353	136 aa	Known RBP	12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	RAP1A	P62834	184 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	ERVK-25	P63136	954 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	SLC34A1	Q06495	639 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	TOP3A	Q13472	1001 aa	Predicted RBP	12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	RIPK1	Q13546	671 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	DAG1	Q14118	895 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	SLC36A3	Q495N2	470 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	KDM4D	Q6B0I6	523 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	GPR139	Q6DWJ6	353 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	UBE2J2	Q8N2K1	259 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	OR6X1	Q8NH79	312 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	LILRB4	Q8NHJ6	448 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	MAGEE2	Q8TD90	523 aa	Predicted RBP	12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	TXNDC15	Q96J42	360 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	EMC6	Q9BV81	110 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	TSSK6	Q9BXA6	273 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	EGLN3	Q9H6Z9	239 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	RNPEPL1	Q9HAU8	725 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	KCNJ16	Q9NPI9	418 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	C8orf4	Q9NR00	106 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	IL20RA	Q9UHF4	553 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	BAIAP2	Q9UQB8	552 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	MPDZ	O75970	2070 aa		12.49	□□□□□ -0.41
NELFA-208	ENST00000443203	CENPBD1	B2RD01	187 aa		12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	EEF1E1-BLOC1S5	C9J1V9	151 aa		12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	XKRY	O14609	159 aa		12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	EI24	O14681	340 aa		12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	IMPA2	O14732	288 aa		12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	EEF1E1	O43324	174 aa	Known RBP	12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	IDH3B	O43837	385 aa		12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	MGRN1	O60291	552 aa		12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	SOX14	O95416	240 aa		12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	CNOT4	O95628	575 aa	Known RBP	12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	IGHG1	P01857	330 aa		12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	NR2C1	P13056	603 aa		12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	APEH	P13798	732 aa	Known RBP	12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	ACVR1B	P36896	505 aa		12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	SELENOP	P49908	381 aa		12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	RAD23A	P54725	363 aa		12.48	□□□□□ -0.41
NELFA-208	ENST00000443203	ESRRG	P62508	458 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 90 ms