RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 PGBD2Q6P3X8 592 aa16.1■□□□□ 0.17
PTX4-202ENST00000440447 C20orf196Q8IYI0 205 aa16.1■□□□□ 0.17
PTX4-202ENST00000440447 OR9Q2Q8NGE9 314 aa16.1■□□□□ 0.17
PTX4-202ENST00000440447 OR6N1Q8NGY5 312 aa16.1■□□□□ 0.17
PTX4-202ENST00000440447 MARVELD3Q96A59 401 aa16.1■□□□□ 0.17
PTX4-202ENST00000440447 DUS3LQ96G46 650 aaKnown RBP16.1■□□□□ 0.17
PTX4-202ENST00000440447 SLC25A44Q96H78 314 aaPredicted RBP16.1■□□□□ 0.17
PTX4-202ENST00000440447 WFIKKN1Q96NZ8 548 aa16.1■□□□□ 0.17
PTX4-202ENST00000440447 GPA33Q99795 319 aa16.1■□□□□ 0.17
PTX4-202ENST00000440447 TXNIPQ9H3M7 391 aa16.1■□□□□ 0.17
PTX4-202ENST00000440447 MCCC2Q9HCC0 563 aa16.1■□□□□ 0.17
PTX4-202ENST00000440447 B3GAT2Q9NPZ5 323 aa16.1■□□□□ 0.17
PTX4-202ENST00000440447 SIGLEC7Q9Y286 467 aa16.1■□□□□ 0.17
PTX4-202ENST00000440447 AP4S1Q9Y587 144 aa16.1■□□□□ 0.17
PTX4-202ENST00000440447 CASKO14936 926 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 DEAF1O75398 565 aaPredicted RBP16.09■□□□□ 0.17
PTX4-202ENST00000440447 E2F6O75461 281 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 TIPRLO75663 272 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 NDUFB2O95178 105 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 ITGA5P08648 1049 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 EPXP11678 715 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 GSSP48637 474 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 CSNK1A1P48729 337 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 FOXG1P55316 489 aaPredicted RBP16.09■□□□□ 0.17
PTX4-202ENST00000440447 ACTR3P61158 418 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 ROR2Q01974 943 aaKnown RBP16.09■□□□□ 0.17
PTX4-202ENST00000440447 TSPAN31Q12999 210 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 KPNB1Q14974 876 aaKnown RBP16.09■□□□□ 0.17
PTX4-202ENST00000440447 ZSCAN26Q16670 478 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 IGFN1Q86VF2 1251 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 LRRC75AQ8NAA5 344 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 ASB10Q8WXI3 467 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 ZNF566Q969W8 418 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 S100PBPQ96BU1 408 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 ALKBH3Q96Q83 286 aaPredicted RBP16.09■□□□□ 0.17
PTX4-202ENST00000440447 POLDIP3Q9BY77 421 aaKnown RBP16.09■□□□□ 0.17
PTX4-202ENST00000440447 ARMC1Q9NVT9 282 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 STX18Q9P2W9 335 aaKnown RBP16.09■□□□□ 0.17
PTX4-202ENST00000440447 HECTD1Q9ULT8 2610 aa16.09■□□□□ 0.17
PTX4-202ENST00000440447 M0R3G1 203 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 RAD51DO75771 328 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 GASTP01350 101 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 IGHG1P01857 330 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 IST1P53990 364 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 RPL27P61353 136 aaKnown RBP16.08■□□□□ 0.16
PTX4-202ENST00000440447 TOP3AQ13472 1001 aaPredicted RBP16.08■□□□□ 0.16
PTX4-202ENST00000440447 OR7E24Q6IFN5 339 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 ZNF770Q6IQ21 691 aaPredicted RBP16.08■□□□□ 0.16
PTX4-202ENST00000440447 SMARCD3Q6STE5 483 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 WDFY1Q8IWB7 410 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 C10orf67Q8IYJ2 551 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 AQP11Q8NBQ7 271 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 OR10G2Q8NGC3 310 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 GIPC3Q8TF64 312 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 ZC3HAV1LQ96H79 300 aaKnown RBP16.08■□□□□ 0.16
PTX4-202ENST00000440447 KATNB1Q9BVA0 655 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 ULBP2Q9BZM5 246 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 GPR35Q9HC97 309 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 ZNF226Q9NYT6 803 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 ZNF346Q9UL40 294 aaKnown RBP16.08■□□□□ 0.16
PTX4-202ENST00000440447 MGAT4BQ9UQ53 548 aa16.08■□□□□ 0.16
PTX4-202ENST00000440447 CENPBD1B2RD01 187 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 RPL36A-HNRNPH2H7BZ11 118 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 IGHMP01871 453 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 CD14P08571 375 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 FCGR1AP12314 374 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 ACADSP16219 412 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 ZNF26P17031 533 aaPredicted RBP16.07■□□□□ 0.16
PTX4-202ENST00000440447 CDH2P19022 906 aaPredicted RBP16.07■□□□□ 0.16
PTX4-202ENST00000440447 FASP25445 335 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 ARHGDIAP52565 204 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 CLRN1P58418 232 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 ERVK-25P63136 954 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 STK11Q15831 433 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 GABRA6Q16445 453 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 ARMC4Q5T2S8 1044 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 LINGO2Q7L985 606 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 P2RY8Q86VZ1 359 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 C1orf162Q8NEQ5 155 aaPredicted RBP16.07■□□□□ 0.16
PTX4-202ENST00000440447 FANK1Q8TC84 345 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 HSD17B8Q92506 261 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 TMEM54Q969K7 222 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 MUS81Q96NY9 551 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 CRLF2Q9HC73 371 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 GLTPQ9NZD2 209 aa16.07■□□□□ 0.16
PTX4-202ENST00000440447 ARRDC5A6NEK1 342 aa16.06■□□□□ 0.16
PTX4-202ENST00000440447 A6NIZ1 184 aa16.06■□□□□ 0.16
PTX4-202ENST00000440447 TRMUO75648 421 aaKnown RBP16.06■□□□□ 0.16
PTX4-202ENST00000440447 PGA4P0DJD7 388 aa16.06■□□□□ 0.16
PTX4-202ENST00000440447 PGA3P0DJD8 388 aa16.06■□□□□ 0.16
PTX4-202ENST00000440447 ACVR1BP36896 505 aa16.06■□□□□ 0.16
PTX4-202ENST00000440447 SH3BGRP55822 239 aaPredicted RBP16.06■□□□□ 0.16
PTX4-202ENST00000440447 RAP1BP61224 184 aa16.06■□□□□ 0.16
PTX4-202ENST00000440447 RAP1AP62834 184 aa16.06■□□□□ 0.16
PTX4-202ENST00000440447 ATP6AP1Q15904 470 aa16.06■□□□□ 0.16
PTX4-202ENST00000440447 CEACAM16Q2WEN9 425 aa16.06■□□□□ 0.16
PTX4-202ENST00000440447 RFX4Q33E94 735 aa16.06■□□□□ 0.16
PTX4-202ENST00000440447 TIMM23BQ5SRD1 257 aa16.06■□□□□ 0.16
PTX4-202ENST00000440447 PHYHD1Q5SRE7 291 aa16.06■□□□□ 0.16
PTX4-202ENST00000440447 FAM205BPQ63HN1 556 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms