RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 NHLRC1Q6VVB1 395 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 FAM122BQ7Z309 247 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 PM20D2Q8IYS1 436 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 FAM174AQ8TBP5 190 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 NSMAFQ92636 917 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 TSLPQ969D9 159 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 SORCS2Q96PQ0 1159 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 CLEC4MQ9H2X3 399 aaPredicted RBP12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 MMP25Q9NPA2 562 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 B3GNT2Q9NY97 397 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 ANXA2P2A6NMY6 339 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 PRAMEF26H0Y7S4 382 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 GABARAPH6UMI1 98 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 ITGA10O75578 1167 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 RGS11O94810 467 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 SIX6O95475 246 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 ANXA2P07355 339 aaKnown RBP12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 UBL4AP11441 157 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 LCN1P31025 176 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 EFNB2P52799 333 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 LBX1P52954 281 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 ARPC4P59998 168 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 GUCA2AQ02747 115 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 ALKBH1Q13686 389 aaKnown RBP12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 GRK1Q15835 563 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 ZNF684Q5T5D7 378 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 LRRN1Q6UXK5 716 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 OR4D10Q8NGI6 311 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 TAAR8Q969N4 342 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 TSPAN32Q96QS1 320 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 LRRC61Q9BV99 259 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 TPSD1Q9BZJ3 242 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 NARFLQ9H6Q4 476 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 FBRSQ9HAH7 460 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 MYEF2Q9P2K5 600 aaKnown RBP12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 TEX46H3BTG2 121 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 PDCD5O14737 125 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 HCRTR2O43614 444 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 CAPZA2P47755 286 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 ART1P52961 327 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 HTR4Q13639 388 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 Q499Y3 187 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 TCTE1Q5JU00 501 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 WBP2NLQ6ICG8 309 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 CHMP1BQ7LBR1 199 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 ATG4DQ86TL0 474 aaPredicted RBP12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 ZNF595Q8IYB9 648 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 SIX5Q8N196 739 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 MEIOBQ8N635 442 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 ZSCAN1Q8NBB4 408 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 OR51D1Q8NGF3 324 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 S1PR5Q9H228 398 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 GLTPQ9NZD2 209 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 KCNG2Q9UJ96 466 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 SCP2D1Q9UJQ7 156 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 FRYLO94915 3013 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 IGHV5-51A0A0C4DH38 117 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 SCDO00767 359 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 SDHAP31040 664 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 TAS2R20P59543 309 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 HSF2Q03933 536 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 FUT7Q11130 342 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 CBFBQ13951 182 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 SLC35D3Q5M8T2 416 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 TTLL10Q6ZVT0 673 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 SLC16A9Q7RTY1 509 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 FGD2Q7Z6J4 655 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 OR8S1Q8NH09 359 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 RBP7Q96R05 134 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 ACTR6Q9GZN1 396 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 UBQLN4Q9NRR5 601 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 DHCR7Q9UBM7 475 aaKnown RBP12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 KDM4BO94953 1096 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 UTS2O95399 124 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 PUDPQ08623 228 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 SKP2Q13309 424 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 SQSTM1Q13501 440 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 DND1Q8IYX4 353 aaKnown RBP12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 DVL3Q92997 716 aaPredicted RBP12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 SLITRK2Q9H156 845 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 HIF3AQ9Y2N7 669 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 HS3ST3A1Q9Y663 406 aa12.3□□□□□ -0.44
HERPUD1-204ENST00000439977 FAM221BA6H8Z2 402 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 OR5K4A6NMS3 321 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 CTDSPLO15194 276 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 ZNF264O43296 627 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 SDC3O75056 442 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 ICOSLGO75144 302 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 CLPSP04118 112 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 RLN1P04808 185 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 TACSTD2P09758 323 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 CD1CP29017 333 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 ETFDHQ16134 617 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 PCGF3Q3KNV8 242 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 KDM8Q8N371 416 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 PTPMT1Q8WUK0 201 aaPredicted RBP12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 MRPL38Q96DV4 380 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 MRPL48Q96GC5 212 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 MSANTD3Q96H12 275 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 OR1F2PQ96R84 312 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms