RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 GDPD3Q7L5L3 318 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 CPNE4Q96A23 557 aaPredicted RBP14.33□□□□□ -0.12
NEDD4-202ENST00000435532 FAM122AQ96E09 287 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 HDGFL3Q9Y3E1 203 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 TMEM72A0PK05 275 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 M0R082 166 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 CXCL13O43927 109 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 EIF4EP06730 217 aaKnown RBP14.33□□□□□ -0.12
NEDD4-202ENST00000435532 CYHR1Q6ZMK1 362 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 LIPHQ8WWY8 451 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 MIB2Q96AX9 1013 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 C1QTNF3Q9BXJ4 246 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 XKR7Q5GH72 579 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 SPRED1Q7Z699 444 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 BEST3Q8N1M1 668 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 TSPAN10Q9H1Z9 355 aaPredicted RBP14.33□□□□□ -0.12
NEDD4-202ENST00000435532 TREM1Q9NP99 234 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 RLIMQ9NVW2 624 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 SPINT2O43291 252 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 OR7C1O76099 320 aaPredicted RBP14.33□□□□□ -0.12
NEDD4-202ENST00000435532 GLCEO94923 617 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 OR8G3PP0DMU2 310 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 GPX2P18283 190 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 FAPQ12884 760 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 GLYR1Q49A26 553 aaPredicted RBP14.33□□□□□ -0.12
NEDD4-202ENST00000435532 UBE2UQ5VVX9 321 aa14.33□□□□□ -0.12
NEDD4-202ENST00000435532 ANKUB1A6NFN9 424 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 TRIM64CA6NLI5 447 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 RP2O75695 350 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 F2RL1P55085 397 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 RUNX2Q13950 521 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 LRRC37A5PQ49AS3 106 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 SERPINA12Q8IW75 414 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 HSD17B8Q92506 261 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 ERVMER34-1Q9H9K5 563 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 COL11A2P13942 1736 aaPredicted RBP14.32□□□□□ -0.12
NEDD4-202ENST00000435532 TNS1Q9HBL0 1735 aaKnown RBP14.32□□□□□ -0.12
NEDD4-202ENST00000435532 KLK8O60259 260 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 ADH6P28332 368 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 ESPNLQ6ZVH7 1005 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 DTX3Q8N9I9 347 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 OR1L3Q8NH93 324 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 APOBEC4Q8WW27 367 aaKnown RBP14.32□□□□□ -0.12
NEDD4-202ENST00000435532 UPRTQ96BW1 309 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 ZNF681Q96N22 645 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 FANCGO15287 622 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 BCKDHBP21953 392 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 ARL3P36405 182 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 MLLT11Q13015 90 aaPredicted RBP14.32□□□□□ -0.12
NEDD4-202ENST00000435532 PLK5Q496M5 336 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 ZNF691Q5VV52 312 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 OR11G2Q8NGC1 345 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 SLAMF8Q9P0V8 285 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 TNFSF11O14788 317 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 IGHV3-9P01782 118 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 OR6V1Q8N148 313 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 OR2A14Q96R47 310 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 FUNDC2Q9BWH2 189 aa14.32□□□□□ -0.12
NEDD4-202ENST00000435532 LGI1O95970 557 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 CPT2P23786 658 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 ILKQ13418 452 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 DPY19L2P1Q6NXN4 242 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 LINC00346Q8IVM7 164 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 CHDHQ8NE62 594 aaPredicted RBP14.31□□□□□ -0.12
NEDD4-202ENST00000435532 MRPL15Q9P015 296 aaKnown RBP14.31□□□□□ -0.12
NEDD4-202ENST00000435532 MGAT4CQ9UBM8 478 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 CTSFQ9UBX1 484 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 KIAA0100Q14667 2235 aaKnown RBP14.31□□□□□ -0.12
NEDD4-202ENST00000435532 MEOX1P50221 254 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 SLC16A9Q7RTY1 509 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 FBXL14Q8N1E6 418 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 GDPD1Q8N9F7 314 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 KCNG3Q8TAE7 436 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 UBL7Q96S82 380 aaPredicted RBP14.31□□□□□ -0.12
NEDD4-202ENST00000435532 HRH3Q9Y5N1 445 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 OTOL1A6NHN0 477 aaPredicted RBP14.31□□□□□ -0.12
NEDD4-202ENST00000435532 C21orf140B9A014 251 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 TNFRSF10AO00220 468 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 CD300LGQ6UXG3 332 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 ADGRF3Q8IZF5 1079 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 S100PBPQ96BU1 408 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 A0A0A6YYH2 397 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 A6NJ64 397 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 GRPP07492 148 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 RAB40ALP0C0E4 278 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 METAP1P53582 386 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 EDDM3BP56851 147 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 SF3A2Q15428 464 aaKnown RBP14.31□□□□□ -0.12
NEDD4-202ENST00000435532 WDR74Q6RFH5 385 aaPredicted RBP14.31□□□□□ -0.12
NEDD4-202ENST00000435532 ABI3BPQ7Z7G0 1075 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 SCCPDHQ8NBX0 429 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 OR4F15Q8NGB8 312 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 OR6T1Q8NGN1 323 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 CA5BP1Q8WTZ4 195 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 RAB40AQ8WXH6 277 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 LRFN5Q96NI6 719 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 BARHL1Q9BZE3 327 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 EBF1Q9UH73 591 aa14.31□□□□□ -0.12
NEDD4-202ENST00000435532 MRPS28Q9Y2Q9 187 aaKnown RBP14.31□□□□□ -0.12
NEDD4-202ENST00000435532 MED16Q9Y2X0 877 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms