RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 GMEB2Q9UKD1 530 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 MOKQ9UQ07 419 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 RNF215Q9Y6U7 377 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 CFAP54Q96N23 3096 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 TRAV8-7A0A075B6U6 113 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 BLACEA4D250 179 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 C17orf51A8MQB3 221 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 AKR7A3O95154 331 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 ABHD16AO95870 558 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 TGM6O95932 706 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 RAB40ALP0C0E4 278 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 APEHP13798 732 aaKnown RBP10.72□□□□□ -0.69
CD44-209ENST00000433892 CD1CP29017 333 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 TACR3P29371 465 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 BLVRAP53004 296 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 SLC37A1P57057 533 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 CDC20BQ86Y33 519 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 DND1Q8IYX4 353 aaKnown RBP10.72□□□□□ -0.69
CD44-209ENST00000433892 ANGPTL6Q8NI99 470 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 ADAMTS18Q8TE60 1221 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 THEM6Q8WUY1 208 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 LIPHQ8WWY8 451 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 RAB40AQ8WXH6 277 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 TAAR8Q969N4 342 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 MIB2Q96AX9 1013 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 HAVCR1Q96D42 359 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 ADOQ96SZ5 270 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 ULBP3Q9BZM4 244 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 RTN4RQ9BZR6 473 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 OR8D2Q9GZM6 311 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 SYT4Q9H2B2 425 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 RABL2AQ9UBK7 228 aaPredicted RBP10.72□□□□□ -0.69
CD44-209ENST00000433892 RABL2BQ9UNT1 228 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 SEC16AO15027 2179 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 WDR87Q6ZQQ6 2873 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 IGHV5-51A0A0C4DH38 117 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 ANKRD20A5PA0PJZ0 165 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 CHURC1-FNTBB4DL54 471 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 C10orf142B7Z368 130 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 H0YC42 278 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 CRYZL1O95825 349 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 PROS1P07225 676 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 CALCBP10092 127 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 ANXA7P20073 488 aaKnown RBP10.72□□□□□ -0.69
CD44-209ENST00000433892 MAPK3P27361 379 aaPredicted RBP10.72□□□□□ -0.69
CD44-209ENST00000433892 ADH7P40394 386 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 CAPZBP47756 277 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 FNTBP49356 437 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 LBX1P52954 281 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 GFERP55789 205 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 TAS2R20P59543 309 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 SNTA1Q13424 505 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 POU4F3Q15319 338 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 LINC00303Q3SY05 128 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 Q6ZS52 159 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 RFPL4BQ6ZWI9 263 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 LRRTM1Q86UE6 522 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 FAM160A2Q8N612 972 aaPredicted RBP10.72□□□□□ -0.69
CD44-209ENST00000433892 ZNF676Q8N7Q3 588 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 CCDC74AQ96AQ1 378 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 KLHDC7BQ96G42 594 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 TGM7Q96PF1 710 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 CLEC4MQ9H2X3 399 aaPredicted RBP10.72□□□□□ -0.69
CD44-209ENST00000433892 DIABLOQ9NR28 239 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 SLC6A5Q9Y345 797 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 NPTNQ9Y639 398 aa10.72□□□□□ -0.69
CD44-209ENST00000433892 TRBV5-5A0A0J9YX44 114 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 A0A1B0GUH1 482 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 NAP1L6A6NFF2 107 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 ANXA2P2A6NMY6 339 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 OR4C45A6NMZ5 311 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 SULT1B1O43704 296 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 PRAF2O60831 178 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 IL33O95760 270 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 TXNDC12O95881 172 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 ANXA2P07355 339 aaKnown RBP10.71□□□□□ -0.69
CD44-209ENST00000433892 ENPP1P22413 925 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 ITPKBP27987 946 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 LCN1P31025 176 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 BLKP51451 505 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 CCR5P51681 352 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 RPL6Q02878 288 aaKnown RBP10.71□□□□□ -0.69
CD44-209ENST00000433892 EXOSC2Q13868 293 aaKnown RBP10.71□□□□□ -0.69
CD44-209ENST00000433892 CCINQ13939 588 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 ELFN2Q5R3F8 820 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 METTL11BQ5VVY1 283 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 SEZ6L2Q6UXD5 910 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 LRRC69Q6ZNQ3 347 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 CCDC28AQ8IWP9 274 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 FTMTQ8N4E7 242 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 EID2Q8N6I1 236 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 OR2G2Q8NGZ5 317 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 RLN3Q8WXF3 142 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 NSMAFQ92636 917 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 TMEM106AQ96A25 262 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 FOXN4Q96NZ1 517 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 CCNL2Q96S94 520 aaPredicted RBP10.71□□□□□ -0.69
CD44-209ENST00000433892 SLC38A3Q99624 504 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 SEMA4CQ9C0C4 833 aa10.71□□□□□ -0.69
CD44-209ENST00000433892 GPR27Q9NS67 375 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms