RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 CEACAM7Q14002 265 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 GPR19Q15760 415 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 ZNF468Q5VIY5 522 aaPredicted RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 DPY19L2P1Q6NXN4 242 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 PARM1Q6UWI2 310 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 DBX2Q6ZNG2 339 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 FGFBP2Q9BYJ0 223 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 CHRNA9Q9UGM1 479 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 TMED7Q9Y3B3 224 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 MT-CO3P00414 261 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 AKAIN1P0CW23 69 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 PPP3CBP16298 524 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 GGT1P19440 569 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 HOXD13P35453 343 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 MTNR1AP48039 350 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 TPMTP51580 245 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 SLC25A11Q02978 314 aaKnown RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 PPP1R8Q12972 351 aaKnown RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 PPP1R3AQ16821 1122 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 HFEQ30201 348 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ZNF766Q5HY98 468 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 WDR5BQ86VZ2 330 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ADGRG3Q86Y34 549 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 OR5W2Q8NH69 310 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 OR5K2Q8NHB8 316 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 C19orf43Q9BQ61 176 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 PCDHAC1Q9H158 963 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ZBP1Q9H171 429 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 PTTG3PQ9NZH4 202 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 OAZ3Q9UMX2 235 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 CLDN1O95832 211 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 NFYAP23511 347 aaPredicted RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 HMGCLP35914 325 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 MRPL19P49406 292 aaKnown RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 CCR5P51681 352 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 KIAA1024LP59773 190 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 HBG1P69891 147 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 HBG2P69892 147 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 SYT6Q5T7P8 510 aaPredicted RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 Q6ZRG5 221 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 SSX9Q7RTT3 188 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 H2BFWTQ7Z2G1 175 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 YRDCQ86U90 279 aaKnown RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 MOGAT3Q86VF5 341 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 GABRG1Q8N1C3 465 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 C4orf32Q8N8J7 132 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 OR13H1Q8NG92 308 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 SLC25A43Q8WUT9 341 aaPredicted RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 OR7D2Q96RA2 312 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 PRRT1Q99946 306 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 SMOC1Q9H4F8 434 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 UCK1Q9HA47 277 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 SLC2A8Q9NY64 477 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 EHFQ9NZC4 300 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ZNF705FA8MVS1 300 aaPredicted RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 TMEM189-UBE2V1I3L0A0 370 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ZNF705DP0CH99 300 aaPredicted RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 ZNF705BP0CI00 300 aaPredicted RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 TNFRSF1AP19438 455 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 C21orf33P30042 268 aaPredicted RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 SOX18P35713 384 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 VEGFCP49767 419 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 PGGT1BP53609 377 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 TPBGQ13641 420 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 GPBAR1Q8TDU6 330 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 MITD1Q8WV92 249 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 SAMD10Q9BYL1 202 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 SYNPO2LQ9H987 977 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 MYO9BQ13459 2157 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 OR2M5A3KFT3 312 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 C2CD4DB7Z1M9 353 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 HNRNPH3P31942 346 aaKnown RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 MFGE8Q08431 387 aaPredicted RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 CNPY1Q3B7I2 92 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ZBED5Q49AG3 693 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 C4orf17Q53FE4 359 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 SHEQ5VZ18 495 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 TXNRD3NBQ6F5E7 133 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ACSM5Q6NUN0 579 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ADAMTSL4Q6UY14 1074 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 KCTD20Q7Z5Y7 419 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ZNF679Q8IYX0 411 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 LMNTD1Q8N9Z9 388 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 MOB3AQ96BX8 217 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ZMYND19Q96E35 227 aaPredicted RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 DMAC2Q9NW81 257 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 MTCH1Q9NZJ7 389 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 COQ4Q9Y3A0 265 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 TIMM9Q9Y5J7 89 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 MROH1Q8NDA8 1641 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 TCRBV7S2A1N4TA0A589 114 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 TMEM233B4DJY2 109 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ZNF736B4DX44 427 aaPredicted RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 SLCO2B1O94956 709 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 C1orf105O95561 183 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 TNFSF8P32971 234 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ECI1P42126 302 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 CLDN8P56748 225 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 EVX2Q03828 476 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ZNF91Q05481 1191 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms