RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 RNF4P78317 190 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 OGFOD3Q6PK18 319 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 PGAP1Q75T13 922 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 CENPOQ9BU64 300 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 THAP10Q9P2Z0 257 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 TLCD2A6NGC4 264 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 NKX6-3A6NJ46 265 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 OIP5O43482 229 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 EIF1BO60739 113 aaKnown RBP16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 RUNX2Q13950 521 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 OR6V1Q8N148 313 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 LILRA3Q8N6C8 439 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 DVL3Q92997 716 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 PRR14Q9BWN1 585 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 PUS1Q9Y606 427 aaKnown RBP eCLIP16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 RAB27BO00194 218 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 SELENOFO60613 162 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 TMEM52BQ4KMG9 183 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 OLIG3Q7RTU3 272 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 OR5M1Q8NGP8 315 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 AMBRA1Q9C0C7 1298 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 SNX11Q9Y5W9 270 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 NSA2O95478 260 aaKnown RBP16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 EIF4EP06730 217 aaKnown RBP16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 GSTP1P09211 210 aaKnown RBP16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 PFN3P60673 137 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 NRARPQ7Z6K4 114 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 WDR5BQ86VZ2 330 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 NIPSNAP1Q9BPW8 284 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 PBX4Q9BYU1 374 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 PCDHGA5Q9Y5G8 931 aa16.57■□□□□ 0.24
ARHGEF28-203ENST00000426542 PHF1O43189 567 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 CSNK1G2P78368 415 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 HENMT1Q5T8I9 393 aaKnown RBP16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 TMEM178AQ8NBL3 297 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 DIMT1Q9UNQ2 313 aaKnown RBP16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 A0A1B0GTW7 788 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 M0QYG6 137 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 M6PRP20645 277 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 NME2P22392 152 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 SSTP61278 116 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 TRIM61Q5EBN2 209 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 LPCAT3Q6P1A2 487 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 SYT13Q7L8C5 426 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 FAM212BQ9NTI7 297 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 PIGLQ9Y2B2 252 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 A0A1B0GVG6 124 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 OLFM2O95897 454 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 B3GALT4O96024 378 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 PSMB1P20618 241 aaKnown RBP16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 ZNF93P35789 620 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 EIF1P41567 113 aaKnown RBP16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 RAB5CP51148 216 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 RAB11AP62491 216 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 TLE4Q04727 773 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 MEP1BQ16820 701 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 LRRC26Q2I0M4 334 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 Q6ZSR9 355 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 FJX1Q86VR8 437 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 SVBPQ8N300 66 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 PFN4Q8NHR9 129 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 PRAMEF25A6NGN4 478 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 AGAP14A8MT82 685 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 GABARAPH6UMI1 98 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 SCAF4O95104 1147 aaKnown RBP16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 GABARAPO95166 117 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 RPA2P15927 270 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 HBG1P69891 147 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 HBG2P69892 147 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 CCSMST1Q4G0I0 132 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 CD300LGQ6UXG3 332 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 STT3BQ8TCJ2 826 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 DCLRE1CQ96SD1 692 aaKnown RBP16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 CTNSO60931 367 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 NAGAP17050 411 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 NPBWR1P48145 328 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 TGM4P49221 684 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 LIM2P55344 173 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 SCCPDHQ8NBX0 429 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 HRASLS5Q96KN8 279 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 ABHD6Q9BV23 337 aa16.56■□□□□ 0.24
ARHGEF28-203ENST00000426542 KDM3BQ7LBC6 1761 aa16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 IMPA2O14732 288 aa16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 EN2P19622 333 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 PPT1P50897 306 aa16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 TBC1D28Q2M2D7 210 aa16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 DCXRQ7Z4W1 244 aa16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 TERB2Q8NHR7 220 aa16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 GOT1L1Q8NHS2 421 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 OR52A1Q9UKL2 312 aa16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 ARPC4-TTLL3A0A0A6YYG9 625 aa16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 LRIT2A6NDA9 550 aa16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 ZNF891A8MT65 544 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 KLRC4-KLRK1H3BQV0 150 aa16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 CASP3P42574 277 aa16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 GALEQ14376 348 aa16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 ZNF511Q8NB15 262 aa16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 ALOX12BO75342 701 aa16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 SLCO2B1O94956 709 aa16.55■□□□□ 0.24
ARHGEF28-203ENST00000426542 WNT11O96014 354 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms