RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 PELI1Q96FA3 418 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 TTYH1Q9H313 450 aaPredicted RBP11.85□□□□□ -0.51
COL12A1-205ENST00000425443 FKRPQ9H9S5 495 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 A0A1B0GTQ1 180 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 A0A1W2PPC4 97 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 RAF1P04049 648 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 TPOP07202 933 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 ACAA2P42765 397 aaKnown RBP11.85□□□□□ -0.51
COL12A1-205ENST00000425443 GPR143P51810 404 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 ACTC1P68032 377 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 ACTA1P68133 377 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 RPL6Q02878 288 aaKnown RBP11.85□□□□□ -0.51
COL12A1-205ENST00000425443 KLF9Q13886 244 aaPredicted RBP11.85□□□□□ -0.51
COL12A1-205ENST00000425443 ELOCQ15369 112 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 HYAL4Q2M3T9 481 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 FAAP20Q6NZ36 180 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 Q6ZTK2 550 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 LINGO2Q7L985 606 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 ZNF595Q8IYB9 648 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 LMF1Q96S06 567 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 EMC7Q9NPA0 242 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 PPP1R14DQ9NXH3 145 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 ING4Q9UNL4 249 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 NUBP2Q9Y5Y2 271 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 RPS10-NUDT3A0A1W2PQS6 291 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 LY86O95711 162 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 HRGP04196 525 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 ANXA3P12429 323 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 RBM34P42696 430 aaKnown RBP11.84□□□□□ -0.51
COL12A1-205ENST00000425443 SOX2P48431 317 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 MMP15P51511 669 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 RPS15P62841 145 aaKnown RBP11.84□□□□□ -0.51
COL12A1-205ENST00000425443 CLEC2AQ6UVW9 174 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 ZNF782Q6ZMW2 699 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-205ENST00000425443 COMMD7Q86VX2 200 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 TPRA1Q86W33 373 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 OR4C3Q8NH37 302 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 C16orf52Q8NHV5 167 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 LGALS14Q8TCE9 139 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 TCTN2Q96GX1 697 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 HSPA12BQ96MM6 686 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 VSTM2LQ96N03 204 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 NKX3-1Q99801 234 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-205ENST00000425443 LMF2Q9BU23 707 aaKnown RBP11.84□□□□□ -0.51
COL12A1-205ENST00000425443 CHIAQ9BZP6 476 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 OR10A5Q9H207 317 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 SLC6A15Q9H2J7 730 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 ESRP2Q9H6T0 727 aaKnown RBP11.84□□□□□ -0.51
COL12A1-205ENST00000425443 DLL4Q9NR61 685 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 ASXL3Q9C0F0 2248 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 TRABD2BA6NFA1 517 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 PRR32B1ATL7 298 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 H7C1C5 153 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 SSNA1O43805 119 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 KLK3P07288 261 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-205ENST00000425443 S1PR1P21453 382 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 PSMD4P55036 377 aaKnown RBP11.84□□□□□ -0.51
COL12A1-205ENST00000425443 NRG3P56975 720 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 LCN6P62502 163 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 POU4F2Q12837 409 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 CHAF1BQ13112 559 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 PON3Q15166 354 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 EXOSC6Q5RKV6 272 aaKnown RBP11.84□□□□□ -0.51
COL12A1-205ENST00000425443 CEP76Q8TAP6 659 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 ATOH1Q92858 354 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-205ENST00000425443 FOXN4Q96NZ1 517 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 SORCS2Q96PQ0 1159 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 WDR77Q9BQA1 342 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-205ENST00000425443 EVA1AQ9H8M9 152 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 PNO1Q9NRX1 252 aaKnown RBP11.84□□□□□ -0.51
COL12A1-205ENST00000425443 TGFBR3LH3BV60 316 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 PIN1P1O15428 100 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 NR2C1P13056 603 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 EXOSC2Q13868 293 aaKnown RBP11.84□□□□□ -0.51
COL12A1-205ENST00000425443 COTL1Q14019 142 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 CD276Q5ZPR3 534 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 CMTM4Q8IZR5 234 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 CARFQ8N187 725 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 OR11G2Q8NGC1 345 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 SPRTNQ9H040 489 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-205ENST00000425443 ZFP57Q9NU63 452 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 COA4Q9NYJ1 87 aa11.84□□□□□ -0.51
COL12A1-205ENST00000425443 ELOA3DA6NLF2 546 aaPredicted RBP11.83□□□□□ -0.52
COL12A1-205ENST00000425443 FLRT2O43155 660 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 FOXS1O43638 330 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 UBL3O95164 117 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 HTR3BO95264 441 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 SULT1A3P0DMM9 295 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 SULT1A4P0DMN0 295 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 ARL4DP49703 201 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 ZNF81P51508 661 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 GBX2P52951 348 aaPredicted RBP11.83□□□□□ -0.52
COL12A1-205ENST00000425443 TRAM1Q15629 374 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 ELOA3BQ3SY89 546 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 AARDQ4LEZ3 155 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 PAN3Q58A45 887 aaKnown RBP11.83□□□□□ -0.52
COL12A1-205ENST00000425443 NPSR1Q6W5P4 371 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 BCORP1Q8N888 145 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 ZNF511Q8NB15 262 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 ZNF248Q8NDW4 579 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms