RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SEMA4CQ9C0C4 833 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 RNF208Q9H0X6 261 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 SLC6A15Q9H2J7 730 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 DPP7Q9UHL4 492 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 CYB5R1Q9UHQ9 305 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 YBX2Q9Y2T7 364 aaKnown RBP16.06■□□□□ 0.16
SDCBP-202ENST00000413219 HRH3Q9Y5N1 445 aa16.06■□□□□ 0.16
SDCBP-202ENST00000413219 TMEM72A0PK05 275 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 OR4C45A6NMZ5 311 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 H0YGG7 62 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 PRAMEF2O60811 474 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 CTAG2O75638 210 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 CDC123O75794 336 aaPredicted RBP16.05■□□□□ 0.16
SDCBP-202ENST00000413219 MGMTP16455 207 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 WASP42768 502 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 CDKN2AP42771 156 aaKnown RBP16.05■□□□□ 0.16
SDCBP-202ENST00000413219 ARF3P61204 181 aaPredicted RBP16.05■□□□□ 0.16
SDCBP-202ENST00000413219 OC90Q02509 493 aaPredicted RBP16.05■□□□□ 0.16
SDCBP-202ENST00000413219 EIF2B5Q13144 721 aaKnown RBP16.05■□□□□ 0.16
SDCBP-202ENST00000413219 MCATQ8IVS2 390 aaKnown RBP16.05■□□□□ 0.16
SDCBP-202ENST00000413219 ZNF511Q8NB15 262 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 PXT1Q8NFP0 134 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 CCDC107Q8WV48 283 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 PMEPA1Q969W9 287 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 COMMD4Q9H0A8 199 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 FKRPQ9H9S5 495 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 SLC17A5Q9NRA2 495 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 ACTR10Q9NZ32 417 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 UPB1Q9UBR1 384 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 KLHDC2Q9Y2U9 406 aa16.05■□□□□ 0.16
SDCBP-202ENST00000413219 TRAV8-7A0A075B6U6 113 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 TMEM272A0A1B0GTI8 110 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.04■□□□□ 0.16
SDCBP-202ENST00000413219 TMEM212A6NML5 194 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 CHURC1-FNTBB4DL54 471 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 H3BUI4 141 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 HOXC4P09017 264 aaPredicted RBP16.04■□□□□ 0.16
SDCBP-202ENST00000413219 GTF2F2P13984 249 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 S1PR1P21453 382 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 AGTR1P30556 359 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 FAM53BQ14153 422 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 PRRT3Q5FWE3 981 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 OR5T3Q8NGG3 340 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 GPR148Q8TDV2 347 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 LIPHQ8WWY8 451 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 EDAQ92838 391 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 SLC38A3Q99624 504 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 GPR174Q9BXC1 333 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 TMEM138Q9NPI0 162 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 A0A087WV48 116 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 A0A0D9SG52 128 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 PLRG1O43660 514 aaKnown RBP16.04■□□□□ 0.16
SDCBP-202ENST00000413219 PMS2P2O95744 297 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 CD14P08571 375 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 CCL5P13501 91 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 RAB38P57729 211 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 PLA2G7Q13093 441 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 TOMM20Q15388 145 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 ETFDHQ16134 617 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 ZNF776Q68DI1 518 aaPredicted RBP16.04■□□□□ 0.16
SDCBP-202ENST00000413219 C11orf88Q6PI97 169 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 LRFN4Q6PJG9 635 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 FAM122BQ7Z309 247 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 OR51S1Q8NGJ8 323 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 OR2G2Q8NGZ5 317 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 CAPN10Q9HC96 672 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 MYOZ1Q9NP98 299 aaPredicted RBP16.04■□□□□ 0.16
SDCBP-202ENST00000413219 OBP2AQ9NY56 170 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 CXXC1Q9P0U4 656 aaPredicted RBP16.04■□□□□ 0.16
SDCBP-202ENST00000413219 CDV3Q9UKY7 258 aaKnown RBP16.04■□□□□ 0.16
SDCBP-202ENST00000413219 HIF3AQ9Y2N7 669 aa16.04■□□□□ 0.16
SDCBP-202ENST00000413219 DOCK9Q9BZ29 2069 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 MPTX1A8MV57 137 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 OR10H2O60403 315 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 SRPX2O60687 465 aaPredicted RBP16.03■□□□□ 0.16
SDCBP-202ENST00000413219 TXNDC12O95881 172 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 MAS1P04201 325 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 ITGB2P05107 769 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 PRSS3P35030 304 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 GJA4P35212 333 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 ADH7P40394 386 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 GRK6P43250 576 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 SORDQ00796 357 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 GXYLT1Q4G148 440 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 NKAIN2Q5VXU1 208 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 DGAT2L6Q6ZPD8 337 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 ZNF440Q8IYI8 595 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 CLEC1AQ8NC01 280 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 OR4N2Q8NGD1 307 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 OR4D10Q8NGI6 311 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 C3orf49Q96BT1 292 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 G6PC3Q9BUM1 346 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 EXO5Q9H790 373 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 RASL12Q9NYN1 266 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 TTLL8A6PVC2 850 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 FAM171A2A8MVW0 826 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 DNASE2O00115 360 aaPredicted RBP16.03■□□□□ 0.16
SDCBP-202ENST00000413219 SPDEFO95238 335 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 RLN2P04090 185 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 RAB3AP20336 220 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms