RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 A6NIZ1 184 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 MKRN2OSH3BPM6 223 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 XKRYO14609 159 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 TFECO14948 347 aaPredicted RBP5.94□□□□□ -1.46
VPS41-204ENST00000413141 SMAD9O15198 467 aaKnown RBP5.94□□□□□ -1.46
VPS41-204ENST00000413141 ARHGEF9O43307 516 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 CXCL13O43927 109 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 APOL3O95236 402 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 BCL10O95999 233 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 RENP00797 406 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 PTHP01270 115 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 IGHA1P01876 353 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 ITGB2P05107 769 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 JUNBP17275 347 aaPredicted RBP5.94□□□□□ -1.46
VPS41-204ENST00000413141 GSTT1P30711 240 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 EIF1AXP47813 144 aaKnown RBP5.94□□□□□ -1.46
VPS41-204ENST00000413141 AGFG1P52594 562 aaKnown RBP5.94□□□□□ -1.46
VPS41-204ENST00000413141 SUCLG1P53597 346 aaKnown RBP5.94□□□□□ -1.46
VPS41-204ENST00000413141 SLC16A1P53985 500 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 CLDN15P56746 228 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 RAC3P60763 192 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 RAP1BP61224 184 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 RPS7P62081 194 aaKnown RBP5.94□□□□□ -1.46
VPS41-204ENST00000413141 RAP1AP62834 184 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 RAB39AQ14964 217 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 POU4F3Q15319 338 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 TBR1Q16650 682 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 KLHL22Q53GT1 634 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 SLC35D3Q5M8T2 416 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 PDSS1Q5T2R2 415 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 UBE2UQ5VVX9 321 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 RNLSQ5VYX0 342 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 NHLRC1Q6VVB1 395 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 B3GLCTQ6Y288 498 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 LRRC69Q6ZNQ3 347 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 Q6ZS92 163 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 SLC35D2Q76EJ3 337 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 SHFQ7M4L6 423 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 HDDC2Q7Z4H3 204 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 GPAT4Q86UL3 456 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 WDFY1Q8IWB7 410 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 UEVLDQ8IX04 471 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 EXD3Q8N9H8 876 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 NOXO1Q8NFA2 376 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 OR51G2Q8NGK0 314 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 C9orf43Q8TAL5 461 aaPredicted RBP5.94□□□□□ -1.46
VPS41-204ENST00000413141 NEIL3Q8TAT5 605 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 SNRNP27Q8WVK2 155 aaKnown RBP5.94□□□□□ -1.46
VPS41-204ENST00000413141 FAR1Q8WVX9 515 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 FCGR1BQ92637 280 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 CPNE4Q96A23 557 aaPredicted RBP5.94□□□□□ -1.46
VPS41-204ENST00000413141 ZHX1-C8orf76Q96EF9 292 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 OXGR1Q96P68 337 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 UCN2Q96RP3 112 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 KCNK17Q96T54 332 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 TEAD3Q99594 435 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 NAA11Q9BSU3 229 aaPredicted RBP5.94□□□□□ -1.46
VPS41-204ENST00000413141 JAM3Q9BX67 310 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 SYT4Q9H2B2 425 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 OR51V1Q9H2C8 321 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 ADGRL4Q9HBW9 690 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 ACOT13Q9NPJ3 140 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 ASB6Q9NWX5 421 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 MED29Q9NX70 200 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 HAO2Q9NYQ3 351 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 VSX1Q9NZR4 365 aaPredicted RBP5.94□□□□□ -1.46
VPS41-204ENST00000413141 KLHL13Q9P2N7 655 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 RASD1Q9Y272 281 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 EXOGQ9Y2C4 368 aaKnown RBP5.94□□□□□ -1.46
VPS41-204ENST00000413141 PCDHGB7Q9Y5F8 929 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 TNRC6AQ8NDV7 1962 aaKnown RBP5.94□□□□□ -1.46
VPS41-204ENST00000413141 FRYQ5TBA9 3013 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 CFAP47Q6ZTR5 3102 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 LOC400499M0QZD8 3231 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 A0A087WV48 116 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 TRGV5A0A0B4J1U4 118 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 SMIM31A0A1B0GVY4 71 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 SLC22A23A1A5C7 686 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 ZNF99A8MXY4 864 aaPredicted RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 C1QTNF9BB2RNN3 333 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 J3QRE1 110 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 K7EM74 188 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 DCTN6O00399 190 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 MYL12BO14950 172 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 TRMUO75648 421 aaKnown RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 SEC14L2O76054 403 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 GLCEO94923 617 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 INMTO95050 263 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 VAMP5O95183 116 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 ACTL6AO96019 429 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 IGHG3P01860 377 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 LCKP06239 509 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 MRPL3P09001 348 aaKnown RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 C1QTNF9P0C862 333 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 ZNF43P17038 809 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 MYL12AP19105 171 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 ENPP1P22413 925 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 DCKP27707 260 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 PYCR1P32322 319 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 GP2P55259 537 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms