RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 A0A1B0GVC2 190 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 GNG14A0A1W2PPG7 69 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 EFCAB10A6NFE3 127 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 TUBAL3A6NHL2 446 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 C19orf84I3L1E1 186 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 GNGT2O14610 69 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 TP53I11O14683 189 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 PDPK1O15530 556 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ARHGEF9O43307 516 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 HCN1O60741 890 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ZNF780AO75290 641 aaPredicted RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ULK1O75385 1050 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 SCAF4O95104 1147 aaKnown RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 LRATO95237 230 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 IL1AP01583 271 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 RFPL3SP0C7P2 107 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 PRPS2P11908 318 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ANXA8P13928 327 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 PRF1P14222 555 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 CSNK2A2P19784 350 aaPredicted RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 S1PR1P21453 382 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 PSMB9P28065 219 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 IFNA8P32881 189 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 PTGER4P35408 488 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 FEN1P39748 380 aaKnown RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 MAP2K4P45985 399 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 HTR6P50406 440 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 CLDN8P56748 225 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 NRG3P56975 720 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 FBXW4P57775 412 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 DSTNP60981 165 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 BTG1P62324 171 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 TRA2BP62995 288 aaKnown RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 RPP38P78345 283 aaKnown RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 IL5RAQ01344 420 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 DUSP2Q05923 314 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 PIGFQ07326 219 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ACSM2AQ08AH3 577 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 LRRC74AQ0VAA2 488 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 MGAT2Q10469 447 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 COX10Q12887 443 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 CSTF3Q12996 717 aaKnown RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 EXOSC7Q15024 291 aaKnown RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 NTRK2Q16620 822 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 TIGD6Q17RP2 521 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 PRICKLE4Q2TBC4 344 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 GXYLT1Q4G148 440 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 Q5BKY6 102 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 MEDAGQ5VYS4 303 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ACSM2BQ68CK6 577 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ENPP6Q6UWR7 440 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 EIF3MQ7L2H7 374 aaKnown RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 GDF7Q7Z4P5 450 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 NRARPQ7Z6K4 114 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ZDHHC21Q8IVQ6 265 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ZZZ3Q8IYH5 903 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ENTHD1Q8IYW4 607 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 PRR22Q8IZ63 422 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ELMOD2Q8IZ81 293 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 MMP21Q8N119 569 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 LRRC25Q8N386 305 aaPredicted RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 RPRMLQ8N4K4 120 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 FAM86B1Q8N7N1 296 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ZNF441Q8N8Z8 693 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 FAM83FQ8NEG4 500 aaPredicted RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 OR5M9Q8NGP3 310 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 CNIH3Q8TBE1 160 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 CA5BP1Q8WTZ4 195 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 DNAJA4Q8WW22 397 aaPredicted RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 APH1BQ8WW43 257 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 RND1Q92730 232 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 GGHQ92820 318 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 SARAFQ96BY9 339 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 C7orf34Q96L11 122 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 FCRL1Q96LA6 429 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 KCNA7Q96RP8 456 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ZBTB18Q99592 522 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 CPPED1Q9BRF8 314 aaPredicted RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 MARVELD1Q9BSK0 173 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 COPS4Q9BT78 406 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 DOHHQ9BU89 302 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 CCDC90BQ9GZT6 254 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 SLC22A4Q9H015 551 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 NXF5Q9H1B4 397 aaKnown RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 PRDM13Q9H4Q3 707 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 PIF1Q9H611 641 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 PROK2Q9HC23 129 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 SH2D2AQ9NP31 389 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ISYNA1Q9NPH2 558 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 SERHLQ9NQF3 203 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ALKBH4Q9NXW9 302 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 SLC25A37Q9NYZ2 338 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 MAT2BQ9NZL9 334 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 SH3BP4Q9P0V3 963 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 EIF3KQ9UBQ5 218 aaKnown RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 CES1P1Q9UKY3 287 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 MAPRE3Q9UPY8 281 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 DLGAP4Q9Y2H0 992 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 CHCHD2Q9Y6H1 151 aaPredicted RBP4.77□□□□□ -1.65
LINC00342-201ENST00000412393 ZNF780BQ9Y6R6 833 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms