RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 NDUFV3P56181 108 aaKnown RBP3.96□□□□□ -1.78
LSM5-205ENST00000409952 ATP6V0D1P61421 351 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 SLC10A7Q0GE19 358 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 CCDC173Q0VFZ6 552 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 GABRA6Q16445 453 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 C17orf58Q2M2W7 97 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 PAN3Q58A45 887 aaKnown RBP3.96□□□□□ -1.78
LSM5-205ENST00000409952 TPRG1LQ5T0D9 272 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 ANKRD26P1Q6NSI1 321 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 ARMCX5Q6P1M9 558 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 TRIM40Q6P9F5 258 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 RFWD3Q6PCD5 774 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 GDPGP1Q6ZNW5 385 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 GDPD3Q7L5L3 318 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 OR2W3Q7Z3T1 314 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 PLA2G4DQ86XP0 818 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 PDIK1LQ8N165 341 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 OR2G2Q8NGZ5 317 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 OR5B3Q8NH48 314 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 TNFRSF14Q92956 283 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 PSMG2Q969U7 264 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 CMTM7Q96FZ5 175 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 PAGE5Q96GU1 130 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 ANKHQ9HCJ1 492 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 GIN1Q9NXP7 522 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 QPCTLQ9NXS2 382 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 SPRR3Q9UBC9 169 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 UBQLN1Q9UMX0 589 aaKnown RBP3.96□□□□□ -1.78
LSM5-205ENST00000409952 RCL1Q9Y2P8 373 aaKnown RBP3.96□□□□□ -1.78
LSM5-205ENST00000409952 PLLPQ9Y342 182 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 AQRO60306 1485 aaKnown RBP eCLIP3.96□□□□□ -1.788e-7■■■□□ 16.1
LSM5-205ENST00000409952 BRD4O60885 1362 aaPredicted RBP3.95□□□□□ -1.78
LSM5-205ENST00000409952 CNTNAP1P78357 1384 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 PMS2P5A8MQ11 134 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 H7C0C1 242 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 SNAP91O60641 907 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 SCN2BO60939 215 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 LCA5LO95447 670 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 SERPINA5P05154 406 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 SNHG28P0DPA3 235 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 NEFHP12036 1026 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 SLC2A5P22732 501 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 IVDP26440 423 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 HTR2CP28335 458 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 GPM6AP51674 278 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 PLK1P53350 603 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 ATP12AP54707 1039 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 LINC01547P58512 204 aaPredicted RBP3.95□□□□□ -1.78
LSM5-205ENST00000409952 PMS2P3Q13401 168 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 ORC2Q13416 577 aaPredicted RBP3.95□□□□□ -1.78
LSM5-205ENST00000409952 ARL6IP1Q15041 203 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 SIX1Q15475 284 aaPredicted RBP3.95□□□□□ -1.78
LSM5-205ENST00000409952 MICAQ29983 383 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 TRMT5Q32P41 509 aaKnown RBP3.95□□□□□ -1.78
LSM5-205ENST00000409952 UTF1Q5T230 341 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 AP1ARQ63HQ0 302 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 ZNF621Q6ZSS3 439 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 LINC00336Q6ZUF6 198 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 ABHD12BQ7Z5M8 362 aaPredicted RBP3.95□□□□□ -1.78
LSM5-205ENST00000409952 LRRTM1Q86UE6 522 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 CYP4Z1Q86W10 505 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 ZNF547Q8IVP9 402 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 PIANPQ8IYJ0 282 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 MCOLN2Q8IZK6 566 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 ZNF502Q8TBZ5 544 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 CXorf40AQ8TE69 158 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 FGF11Q92914 225 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 KCTD14Q9BQ13 255 aaPredicted RBP3.95□□□□□ -1.78
LSM5-205ENST00000409952 MED10Q9BTT4 135 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 ANGPTL4Q9BY76 406 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 OCR1Q9BZK8 76 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 CHIAQ9BZP6 476 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 NMUR2Q9GZQ4 415 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 MMP28Q9H239 520 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 PATZ1Q9HBE1 687 aaKnown RBP3.95□□□□□ -1.78
LSM5-205ENST00000409952 LY9Q9HBG7 655 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 VCX3AQ9NNX9 186 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 OR2S2Q9NQN1 319 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 AGPAT4Q9NRZ5 378 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 ZNF282Q9UDV7 671 aaPredicted RBP3.95□□□□□ -1.78
LSM5-205ENST00000409952 RSPH14Q9UHP6 348 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 LGALS13Q9UHV8 139 aa3.95□□□□□ -1.78
LSM5-205ENST00000409952 A0A1B0GW15 77 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 TSPAN11A1L157 253 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 USP27XA6NNY8 438 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 G3V3Y1 287 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 RNASEK-C17orf49H0YIS7 233 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 K7ENP7 123 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 SLC17A2O00624 439 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 MRPS12O15235 138 aaKnown RBP3.94□□□□□ -1.78
LSM5-205ENST00000409952 MBTPS2O43462 519 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 CLDN11O75508 207 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 FADS2O95864 444 aaKnown RBP3.94□□□□□ -1.78
LSM5-205ENST00000409952 ALPLP05186 524 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 ACSM4P0C7M7 580 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 GNB3P16520 340 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 TBPP20226 339 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 ADORA2BP29275 332 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 CHRNB4P30926 498 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 OR1E1P30953 314 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms