RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 FAM86C1Q9NVL1 165 aa12.65□□□□□ -0.38
PRAME-205ENST00000405655 RHBDL2Q9NX52 303 aa12.65□□□□□ -0.38
PRAME-205ENST00000405655 KCNG2Q9UJ96 466 aa12.65□□□□□ -0.38
PRAME-205ENST00000405655 DCHS1Q96JQ0 3298 aa12.65□□□□□ -0.38
PRAME-205ENST00000405655 SLC16A7O60669 478 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 RAD1O60671 282 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 DXOO77932 396 aaKnown RBP12.64□□□□□ -0.39
PRAME-205ENST00000405655 MYBPHQ13203 477 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 GGTLC2Q14390 218 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 DMKNQ6E0U4 476 aaPredicted RBP12.64□□□□□ -0.39
PRAME-205ENST00000405655 SLC22A16Q86VW1 577 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 TIGD4Q8IY51 512 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 RDH10Q8IZV5 341 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 ZNF519Q8TB69 540 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 OIT3Q8WWZ8 545 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 TTC9Q92623 222 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 ADAD1Q96M93 576 aaKnown RBP12.64□□□□□ -0.39
PRAME-205ENST00000405655 LRFN5Q96NI6 719 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 NXT1Q9UKK6 140 aaKnown RBP12.64□□□□□ -0.39
PRAME-205ENST00000405655 HPGDSO60760 199 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 RGS9O75916 674 aaPredicted RBP12.64□□□□□ -0.39
PRAME-205ENST00000405655 OR6A2O95222 327 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 TXNDC12O95881 172 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 HLA-DQA2P01906 255 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 HLA-DPB1P04440 258 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 OR2T7P0C7T2 308 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 SLC2A2P11168 524 aaPredicted RBP12.64□□□□□ -0.39
PRAME-205ENST00000405655 EDNRAP25101 427 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 FGF9P31371 208 aaPredicted RBP12.64□□□□□ -0.39
PRAME-205ENST00000405655 DNASE1L1P49184 302 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 ZNF41P51814 821 aaPredicted RBP12.64□□□□□ -0.39
PRAME-205ENST00000405655 PPP5CP53041 499 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 GPR85P60893 370 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 RPL27P61353 136 aaKnown RBP12.64□□□□□ -0.39
PRAME-205ENST00000405655 PSPHP78330 225 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 ZNF79Q15937 498 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 SLC25A35Q3KQZ1 300 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 NDUFAF7Q7L592 441 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 RPS19BP1Q86WX3 136 aaKnown RBP12.64□□□□□ -0.39
PRAME-205ENST00000405655 SUMF1Q8NBK3 374 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 OR2T27Q8NH04 317 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 CCNL2Q96S94 520 aaPredicted RBP12.64□□□□□ -0.39
PRAME-205ENST00000405655 TIGARQ9NQ88 270 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 MRPL22Q9NWU5 206 aaKnown RBP12.64□□□□□ -0.39
PRAME-205ENST00000405655 MRM2Q9UI43 246 aaKnown RBP12.64□□□□□ -0.39
PRAME-205ENST00000405655 PCDHGB2Q9Y5G2 931 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 PCDHGA5Q9Y5G8 931 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 V9GYH0 126 aa12.64□□□□□ -0.39
PRAME-205ENST00000405655 IGHV3-15A0A0B4J1V0 119 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 IDH3BO43837 385 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 IL1AP01583 271 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 GDI2P50395 445 aaKnown RBP12.63□□□□□ -0.39
PRAME-205ENST00000405655 RPS11P62280 158 aaKnown RBP eCLIP12.63□□□□□ -0.39
PRAME-205ENST00000405655 POU3F1Q03052 451 aaPredicted RBP12.63□□□□□ -0.39
PRAME-205ENST00000405655 CDONQ4KMG0 1287 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 ARMC4Q5T2S8 1044 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 HES3Q5TGS1 186 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 LYSMD2Q8IV50 215 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 THEM6Q8WUY1 208 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 THAP4Q8WY91 577 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 TMEM234Q8WY98 164 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 OR5B2Q96R09 309 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 OR14A2Q96R54 314 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 NKX3-1Q99801 234 aaPredicted RBP12.63□□□□□ -0.39
PRAME-205ENST00000405655 ATF6BQ99941 703 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 B9D1Q9UPM9 204 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 PCDHGB6Q9Y5F9 930 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 MUC6Q6W4X9 2439 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 TRBV2A0A0J9YWF9 115 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 PRSS37A4D1T9 235 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 PLPP2O43688 288 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 MT-CO3P00414 261 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 IGF2P01344 180 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 ZNF806P0C7X5 589 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 SIRPAP78324 504 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 LGALS3BPQ08380 585 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 CD300CQ08708 224 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 CARTPTQ16568 116 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 BAK1Q16611 211 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 RGS21Q2M5E4 152 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 TMEM176BQ3YBM2 270 aaPredicted RBP12.63□□□□□ -0.39
PRAME-205ENST00000405655 ACSM3Q53FZ2 586 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 ATP1A1-AS1Q5TC04 95 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 EEF1A1P5Q5VTE0 462 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 TMEM156Q8N614 296 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 OR4K17Q8NGC6 315 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 OR10AC1Q8NH08 325 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 ST8SIA1Q92185 356 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 RGP1Q92546 391 aaPredicted RBP12.63□□□□□ -0.39
PRAME-205ENST00000405655 CEP19Q96LK0 163 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 TAAR9Q96RI9 348 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 SPRY4Q9C004 299 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 TMEM9BQ9NQ34 198 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 IL17BQ9UHF5 180 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 FARSAQ9Y285 508 aaKnown RBP12.63□□□□□ -0.39
PRAME-205ENST00000405655 GSTK1Q9Y2Q3 226 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 COA3Q9Y2R0 106 aaPredicted RBP12.63□□□□□ -0.39
PRAME-205ENST00000405655 PEX16Q9Y5Y5 336 aa12.63□□□□□ -0.39
PRAME-205ENST00000405655 ZNF407Q9C0G0 2248 aa12.62□□□□□ -0.39
PRAME-205ENST00000405655 SLC22A23A1A5C7 686 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms