RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 PDLIM1O00151 329 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 NDUFB2O95178 105 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 COX5AP20674 150 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 RPL4P36578 427 aaKnown RBP12.07□□□□□ -0.48
VPREB1-202ENST00000403807 ARHGDIAP52565 204 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 PPP1R8Q12972 351 aaKnown RBP12.07□□□□□ -0.48
VPREB1-202ENST00000403807 FHL1Q13642 323 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 CCNIQ14094 377 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 MELKQ14680 651 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 TSC22D1Q15714 1073 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 ACKR1Q16570 336 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 P2RY8Q86VZ1 359 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 C20orf196Q8IYI0 205 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 TMEM123Q8N131 208 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 ZNF566Q969W8 418 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 S100PBPQ96BU1 408 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 DUS3LQ96G46 650 aaKnown RBP12.07□□□□□ -0.48
VPREB1-202ENST00000403807 DNAJB9Q9UBS3 223 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 ZNF346Q9UL40 294 aaKnown RBP12.07□□□□□ -0.48
VPREB1-202ENST00000403807 SIGLEC7Q9Y286 467 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 AP4S1Q9Y587 144 aa12.07□□□□□ -0.48
VPREB1-202ENST00000403807 CENPBD1B2RD01 187 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 RPL36A-HNRNPH2H7BZ11 118 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 M0R3G1 203 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 KLF4O43474 513 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 RAD51DO75771 328 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 GASTP01350 101 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 IGHG1P01857 330 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 ITGA5P08648 1049 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 FPR3P25089 353 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 CCKARP32238 428 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 GSSP48637 474 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 CSNK1A1P48729 337 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 FOXG1P55316 489 aaPredicted RBP12.06□□□□□ -0.48
VPREB1-202ENST00000403807 RPL27P61353 136 aaKnown RBP12.06□□□□□ -0.48
VPREB1-202ENST00000403807 ROR2Q01974 943 aaKnown RBP12.06□□□□□ -0.48
VPREB1-202ENST00000403807 LGALS3BPQ08380 585 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 TSPAN31Q12999 210 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 DAZAP2Q15038 168 aaPredicted RBP12.06□□□□□ -0.48
VPREB1-202ENST00000403807 TIMM23BQ5SRD1 257 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 C9orf135Q5VTT2 229 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 PGBD2Q6P3X8 592 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 SSX8Q7RTT4 187 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 LRRC75AQ8NAA5 344 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 GIPC3Q8TF64 312 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 MUCL1Q96DR8 90 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 C14orf79Q96F83 325 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 ZC3HAV1LQ96H79 300 aaKnown RBP12.06□□□□□ -0.48
VPREB1-202ENST00000403807 MUS81Q96NY9 551 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 GPA33Q99795 319 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 GPR35Q9HC97 309 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 ARMC1Q9NVT9 282 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 GLTPQ9NZD2 209 aa12.06□□□□□ -0.48
VPREB1-202ENST00000403807 DEAF1O75398 565 aaPredicted RBP12.05□□□□□ -0.48
VPREB1-202ENST00000403807 E2F6O75461 281 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 TIPRLO75663 272 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 IGHMP01871 453 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 CD14P08571 375 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 ACADSP16219 412 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 CDH2P19022 906 aaPredicted RBP12.05□□□□□ -0.48
VPREB1-202ENST00000403807 SSTR2P30874 369 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 ACVR1BP36896 505 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 SH3BGRP55822 239 aaPredicted RBP12.05□□□□□ -0.48
VPREB1-202ENST00000403807 CLRN1P58418 232 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 ACTR3P61158 418 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 STK11Q15831 433 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 GABRA6Q16445 453 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 CEACAM16Q2WEN9 425 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 RFX4Q33E94 735 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 ARMC4Q5T2S8 1044 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 FAM205BPQ63HN1 556 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 SMARCD3Q6STE5 483 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 IGFN1Q86VF2 1251 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 ZNF295-AS1Q8N0V1 137 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 C1orf162Q8NEQ5 155 aaPredicted RBP12.05□□□□□ -0.48
VPREB1-202ENST00000403807 OR10G2Q8NGC3 310 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 OR9Q2Q8NGE9 314 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 ASB10Q8WXI3 467 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 TMEM54Q969K7 222 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 ALKBH3Q96Q83 286 aaPredicted RBP12.05□□□□□ -0.48
VPREB1-202ENST00000403807 POLDIP3Q9BY77 421 aaKnown RBP12.05□□□□□ -0.48
VPREB1-202ENST00000403807 ULBP2Q9BZM5 246 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 CRLF2Q9HC73 371 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 NGBQ9NPG2 151 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 VNN3Q9NY84 501 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 GRHPRQ9UBQ7 328 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 MGAT4BQ9UQ53 548 aa12.05□□□□□ -0.48
VPREB1-202ENST00000403807 UTP20O75691 2785 aaKnown RBP12.05□□□□□ -0.48
VPREB1-202ENST00000403807 FREM1Q5H8C1 2179 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 A6NIZ1 184 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 TRMUO75648 421 aaKnown RBP12.04□□□□□ -0.48
VPREB1-202ENST00000403807 GOSR1O95249 250 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 PGA4P0DJD7 388 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 PGA3P0DJD8 388 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 FCGR1AP12314 374 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 NR2C1P13056 603 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 HOXB1P14653 301 aaPredicted RBP12.04□□□□□ -0.48
VPREB1-202ENST00000403807 GSTM3P21266 225 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 CRYGSP22914 178 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 FASP25445 335 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms