RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 NPY4RP50391 375 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 METTL4Q8N3J2 472 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 ISG20Q96AZ6 181 aaKnown RBP12.7□□□□□ -0.38
VAPA-202ENST00000400000 REEP6Q96HR9 211 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 RANGRFQ9HD47 186 aaPredicted RBP12.7□□□□□ -0.38
VAPA-202ENST00000400000 PURGQ9UJV8 347 aaKnown RBP12.7□□□□□ -0.38
VAPA-202ENST00000400000 DEGS1O15121 323 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 OR8U8P0C7N1 319 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 GIPRP48546 466 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 SRP9P49458 86 aaKnown RBP12.7□□□□□ -0.38
VAPA-202ENST00000400000 CYCSP99999 105 aaKnown RBP12.7□□□□□ -0.38
VAPA-202ENST00000400000 ETFBKMTQ8IXQ9 262 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 ZNF595Q8IYB9 648 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 CPXM2Q8N436 756 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 RPL3LQ92901 407 aaKnown RBP12.7□□□□□ -0.38
VAPA-202ENST00000400000 FAM173AQ9BQD7 235 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 CXorf36Q9H7Y0 433 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 CRLF2Q9HC73 371 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 BABAM2Q9NXR7 383 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 SIRPB1O00241 398 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 ATXN1LP0C7T5 689 aaKnown RBP12.7□□□□□ -0.38
VAPA-202ENST00000400000 MPEG1Q2M385 716 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 LAX1Q8IWV1 398 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 RBM12BQ8IXT5 1001 aaKnown RBP12.7□□□□□ -0.38
VAPA-202ENST00000400000 GOT1L1Q8NHS2 421 aaPredicted RBP12.7□□□□□ -0.38
VAPA-202ENST00000400000 SLC25A31Q9H0C2 315 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 SEMA6CQ9H3T2 930 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 SPHK1Q9NYA1 384 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 MRPS2Q9Y399 296 aaKnown RBP12.7□□□□□ -0.38
VAPA-202ENST00000400000 CTDSP2O14595 271 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 RFPL3O75679 317 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 OR8G1Q15617 311 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 ADGRG5Q8IZF4 528 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 PATZ1Q9HBE1 687 aaKnown RBP12.7□□□□□ -0.38
VAPA-202ENST00000400000 FSCN3Q9NQT6 498 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 MARCH5Q9NX47 278 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 RNF150Q9ULK6 438 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 A0A1B0GVG6 124 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 PCBP3P57721 371 aaKnown RBP12.69□□□□□ -0.38
VAPA-202ENST00000400000 BCL7AQ4VC05 210 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 LCORQ96JN0 433 aaPredicted RBP12.69□□□□□ -0.38
VAPA-202ENST00000400000 CNTNAP3Q9BZ76 1288 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 SHARPINQ9H0F6 387 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 METTL17Q9H7H0 456 aaPredicted RBP12.69□□□□□ -0.38
VAPA-202ENST00000400000 TREX1Q9NSU2 369 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 ZNF814B7Z6K7 855 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 TRAF3IP2O43734 574 aaPredicted RBP12.69□□□□□ -0.38
VAPA-202ENST00000400000 PPT1P50897 306 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 CCR6P51684 374 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 ZNF691Q5VV52 312 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 GDPD1Q8N9F7 314 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 ANKLE1Q8NAG6 615 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 FNDC8Q8TC99 324 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 ZNF75AQ96N20 296 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 GLIPR2Q9H4G4 154 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 GAPDHSO14556 408 aaPredicted RBP12.69□□□□□ -0.38
VAPA-202ENST00000400000 XRCC3O43542 346 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 SIX6O95475 246 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 BCKDHBP21953 392 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 GABREP78334 506 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 SLC35A1P78382 337 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 RBM45Q8IUH3 476 aaKnown RBP12.69□□□□□ -0.38
VAPA-202ENST00000400000 SLC35F3Q8IY50 421 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 PARP16Q8N5Y8 322 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 TMEM178AQ8NBL3 297 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 OR10X1Q8NGY0 326 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 EDEM2Q9BV94 578 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 ZNF696Q9H7X3 374 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 URGCP-MRPS24S4R325 110 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 ZFP92A6NM28 416 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 BHLHE40O14503 412 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 APOA2P02652 100 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 DAPP51397 102 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 CAMK2BQ13554 666 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 GAB3Q8WWW8 586 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 MKRN2Q9H000 416 aaKnown RBP12.69□□□□□ -0.38
VAPA-202ENST00000400000 PLK3Q9H4B4 646 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 PLSCR3Q9NRY6 295 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 WDR37Q9Y2I8 494 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 IGFBP6P24592 240 aaPredicted RBP12.69□□□□□ -0.38
VAPA-202ENST00000400000 PPIAP62937 165 aaKnown RBP12.69□□□□□ -0.38
VAPA-202ENST00000400000 SPATA46Q5T0L3 261 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 PGAP1Q75T13 922 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 CBARPQ8N350 705 aaPredicted RBP12.69□□□□□ -0.38
VAPA-202ENST00000400000 GHSRQ92847 366 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 MED18Q9BUE0 208 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 ESRP2Q9H6T0 727 aaKnown RBP12.69□□□□□ -0.38
VAPA-202ENST00000400000 KIF25Q9UIL4 384 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 ENPP5Q9UJA9 477 aa12.69□□□□□ -0.38
VAPA-202ENST00000400000 AQP7P3A6NL99 342 aa12.68□□□□□ -0.38
VAPA-202ENST00000400000 CRYZL1O95825 349 aa12.68□□□□□ -0.38
VAPA-202ENST00000400000 FOLR1P15328 257 aa12.68□□□□□ -0.38
VAPA-202ENST00000400000 UBE2KP61086 200 aa12.68□□□□□ -0.38
VAPA-202ENST00000400000 C17orf67Q0P5P2 114 aa12.68□□□□□ -0.38
VAPA-202ENST00000400000 SPEM2Q0P670 501 aa12.68□□□□□ -0.38
VAPA-202ENST00000400000 NECAP1Q8NC96 275 aa12.68□□□□□ -0.38
VAPA-202ENST00000400000 OR52N5Q8NH56 324 aa12.68□□□□□ -0.38
VAPA-202ENST00000400000 TCTEX1D2Q8WW35 142 aa12.68□□□□□ -0.38
VAPA-202ENST00000400000 TRUB1Q8WWH5 349 aaKnown RBP12.68□□□□□ -0.38
VAPA-202ENST00000400000 TVP23CQ96ET8 276 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms