RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 ATG4CQ96DT6 458 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 RBM24Q9BX46 236 aaKnown RBP8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 MTHFD2LQ9H903 347 aaPredicted RBP8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 GPRC5CQ9NQ84 441 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 PRAMEF25A6NGN4 478 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 POM121CA8CG34 1229 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 PRAMEF26H0Y7S4 382 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 COX7A2P2O60397 106 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 EGLN3Q9H6Z9 239 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 SETD1AO15047 1707 aaKnown RBP8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 GAGE10A6NGK3 116 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 RPEL1Q2QD12 228 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 ADAMTS16Q8TE57 1224 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 DPF2Q92785 391 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 PDGFAP04085 211 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 FUT4P22083 530 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 MRPS5P82675 430 aaKnown RBP8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 CST9Q5W186 159 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 OR8G2PQ6IF36 304 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 USP53Q70EK8 1073 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 GPR32P1Q8NGA4 272 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 V9GY05 133 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 IL4P05112 153 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 PIRTP0C851 137 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 ZNF85Q03923 595 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 OR2B11Q5JQS5 317 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 TMEM217Q8N7C4 229 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 LINC00469Q8N7U9 141 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 ANKLE1Q8NAG6 615 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 OR5AK3PQ8NH89 298 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 L3HYPDHQ96EM0 354 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 EBF2Q9HAK2 575 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 PRDM4Q9UKN5 801 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 TMEM2Q9UHN6 1383 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 GPR171O14626 319 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 SELEP16581 610 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 RPS15AP62244 130 aaKnown RBP8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC24A5Q71RS6 500 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 OR10AD1Q8NGE0 317 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 OR52E2Q8NGJ4 325 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 MYOZ3Q8TDC0 251 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 ZPBPQ9BS86 351 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 ANKRD60Q9BZ19 345 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 CNTD2Q9H8S5 307 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 CHST11Q9NPF2 352 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 EBF1Q9UH73 591 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 SAP18O00422 153 aaKnown RBP8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 ERVFRD-1P60508 538 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 PMS2P11Q13670 270 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 PIWIL3Q7Z3Z3 882 aaKnown RBP8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 OR52B6Q8NGF0 335 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 BIVM-ERCC5R4GMW8 1640 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 RCCD1A6NED2 376 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 LACTBL1A8MY62 500 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 CORTO00230 105 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 ISLRO14498 428 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 EMC8O43402 210 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 KCNE1P15382 129 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 VIPR2P41587 438 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 MEP1AQ16819 746 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 NIPA1Q7RTP0 329 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 NRMQ8IXM6 262 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 LGI3Q8N145 548 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 TAAR9Q96RI9 348 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 PRSS1P07477 247 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 ZNF30P17039 623 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 KCNG3Q8TAE7 436 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 SIRT3Q9NTG7 399 aaPredicted RBP8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 OR5V1Q9UGF6 321 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 GPR31O00270 319 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 ABHD16AO95870 558 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 ITGAMP11215 1152 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 PCGF2P35227 344 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 FITM2Q8N6M3 262 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 NSUN5Q96P11 429 aaKnown RBP8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 AQP7P3A6NL99 342 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 ALKAL2Q6UX46 152 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 GPR26Q8NDV2 337 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 TLR9Q9NR96 1032 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 SMIM30A4D0T7 59 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 IGHG1P01857 330 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 CA5AP35218 305 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 RPUSD3Q6P087 351 aaKnown RBP8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 TMEM134Q9H6X4 195 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC6A20Q9NP91 592 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 OR52A1Q9UKL2 312 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 CCDC187A0A096LP49 1063 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 GABRPO00591 440 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 AQP9O43315 295 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 WNT11O96014 354 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 CAPNS1P04632 268 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 FAM163BP0C2L3 166 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 EMX2Q04743 252 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 KCNAB2Q13303 367 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 IAH1Q2TAA2 248 aaPredicted RBP8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 OR51A2Q8NGJ7 313 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 POP1Q99575 1024 aaKnown RBP8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 TTTY10Q9BZA0 68 aa8.01□□□□□ -1.13
CACNA1C-220ENST00000399655 ZNF696Q9H7X3 374 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms