RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 YIPF7Q8N8F6 280 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ZNF454Q8N9F8 522 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 OR4M2Q8NGB6 313 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 MFSD8Q8NHS3 518 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ZNF524Q96C55 264 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 OR14A2Q96R54 314 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 TRAF4Q9BUZ4 470 aaPredicted RBP16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 POTEKPQ9BYX7 375 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 COMMD4Q9H0A8 199 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 COPZ2Q9P299 210 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 MRM2Q9UI43 246 aaKnown RBP16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 U3KQA8 63 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 LINC00854A0A1B0GVQ3 168 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 A0A1W2PQM1 296 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 TMEM72A0PK05 275 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 TMEM221A6NGB7 291 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 AIPO00170 330 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 PLPP3O14495 311 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 ARHGEF9O43307 516 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 SIGLEC6O43699 453 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 SULT1B1O43704 296 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 SCO2O43819 266 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 ZFAND5O76080 213 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 ZFPL1O95159 310 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 CALCBP10092 127 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 RAB25P57735 213 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 TRA2AQ13595 282 aaKnown RBP eCLIP16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 COL28A1Q2UY09 1125 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 HLA-BQ31612 363 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 SLC25A35Q3KQZ1 300 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 UBE2NLQ5JXB2 153 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 ZNF385CQ66K41 422 aaPredicted RBP16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 ZNF57Q68EA5 555 aaPredicted RBP16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 TIGD3Q6B0B8 471 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 TMEM205Q6UW68 189 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 LRRN1Q6UXK5 716 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 OTOSQ8NHW6 89 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 DERL3Q96Q80 235 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 CTRCQ99895 268 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 PDCD1LG2Q9BQ51 273 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 OR2B2Q9GZK3 357 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 WDR54Q9H977 334 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 NOX4Q9NPH5 578 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 MALT1Q9UDY8 824 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 B9D1Q9UPM9 204 aa16.02■□□□□ 0.15
HLA-DQB1-204ENST00000399084 IGLV3-32A0A0A0MS00 114 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 TRBV5-5A0A0J9YX44 114 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 ADAM10O14672 748 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 SERPINI2O75830 405 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 FGF5P12034 268 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 ATF1P18846 271 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 SLC6A1P30531 599 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 ACKR1Q16570 336 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 SLC25A53Q5H9E4 307 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 KCTD18Q6PI47 426 aaPredicted RBP16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 PAPD4Q6PIY7 484 aaKnown RBP16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 DNM1P34Q6PK57 102 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 CPEB2Q7Z5Q1 589 aaKnown RBP16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 ZNF417Q8TAU3 575 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 HGDQ93099 445 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 MAP6Q96JE9 813 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 MMP28Q9H239 520 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 SYT4Q9H2B2 425 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 BRD7Q9NPI1 651 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 FANCFQ9NPI8 374 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 PRMT8Q9NR22 394 aaPredicted RBP16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 ATXN7L1Q9ULK2 861 aaPredicted RBP16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 V9GY05 133 aa16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 ARID1BQ8NFD5 2236 aaPredicted RBP16.01■□□□□ 0.15
HLA-DQB1-204ENST00000399084 IFITM5A6NNB3 132 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 TFECO14948 347 aaPredicted RBP16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 KHNYNO15037 678 aaKnown RBP16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 RAB40ALP0C0E4 278 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 PSKH1P11801 424 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 MYF5P13349 255 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 GRPRP30550 384 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 PSMB10P40306 273 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 MRPS10P82664 201 aaKnown RBP16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 ROM1Q03395 351 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 CARTPTQ16568 116 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 PWWP2BQ6NUJ5 590 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 TMPRSS9Q7Z410 1059 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 OR13C5Q8NGS8 318 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 CEP76Q8TAP6 659 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 ZNF671Q8TAW3 534 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 RAB40AQ8WXH6 277 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 SLC7A6Q92536 515 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 TRIM63Q969Q1 353 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 RNF166Q96A37 237 aaPredicted RBP16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 DDIT4LQ96D03 193 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 NXPE2Q96DL1 559 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 TSSK2Q96PF2 358 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 NEK6Q9HC98 313 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 TCF7L1Q9HCS4 588 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 ETV7Q9Y603 341 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 CACNA1EQ15878 2313 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 RP1P56715 2156 aa16■□□□□ 0.15
HLA-DQB1-204ENST00000399084 FTCDNL1E5RQL4 147 aa15.99■□□□□ 0.15
HLA-DQB1-204ENST00000399084 DCTN6O00399 190 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms