RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 MALT1Q9UDY8 824 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 FOXD3Q9UJU5 478 aaPredicted RBP10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OAZ3Q9UMX2 235 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ADAM18Q9Y3Q7 739 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CDH10Q9Y6N8 788 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ICE1Q9Y2F5 2266 aa10.96□□□□□ -0.66
HLA-DQB1-203ENST00000399082 SAC3D1A6NKF1 404 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 NDUFB2O95178 105 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ADAP00813 363 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 IGFBP2P18065 325 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 COX5AP20674 150 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 DAPP51397 102 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 CTXN1P60606 82 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 PRPS1P60891 318 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ERVK-25P63136 954 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 SMARCD3Q6STE5 483 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 STAC2Q6ZMT1 411 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 C20orf196Q8IYI0 205 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ZNF100Q8IYN0 542 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 PQLC1Q8N2U9 271 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 CLDN22Q8N7P3 220 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ACBD4Q8NC06 268 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 OR6X1Q8NH79 312 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 NMD3Q96D46 503 aaKnown RBP10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 SAMD8Q96LT4 415 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 PSMG3-AS1Q96PY0 264 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ALKBH3Q96Q83 286 aaPredicted RBP10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 BDH2Q9BUT1 245 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 RBM24Q9BX46 236 aaKnown RBP10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 MRPL13Q9BYD1 178 aaKnown RBP10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 SLCO5A1Q9H2Y9 848 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 TXNIPQ9H3M7 391 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 SMURF2Q9HAU4 748 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 KCNJ16Q9NPI9 418 aa10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 TMEFF2Q9UIK5 374 aaPredicted RBP10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ZNF346Q9UL40 294 aaKnown RBP10.95□□□□□ -0.66
HLA-DQB1-203ENST00000399082 A0A1W2PRG6 482 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 A1L4Q6 167 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 IMPA2O14732 288 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 MITFO75030 526 aaPredicted RBP10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 TRMUO75648 421 aaKnown RBP10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 SOX14O95416 240 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 PPP1R3DO95685 299 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 CD14P08571 375 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ITGA5P08648 1049 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 PGA4P0DJD7 388 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 PGA3P0DJD8 388 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ZNF23P17027 643 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 IGHV1-2P23083 117 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 RPL27P61353 136 aaKnown RBP10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 PPP2R2BQ00005 443 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 FAM27E3Q08E93 113 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 TOP3AQ13472 1001 aaPredicted RBP10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 CAMK2DQ13557 499 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 TSC22D1Q15714 1073 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 RFX4Q33E94 735 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 MESTQ5EB52 335 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 CARD17Q5XLA6 110 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 FBXW9Q5XUX1 488 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 Q6ZT83 130 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 HIPK1Q86Z02 1210 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 SVOPLQ8N434 492 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ICA1LQ8NDH6 482 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 OR4Q3Q8NH05 313 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 HDAC2Q92769 488 aaKnown RBP10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 RNASE6Q93091 150 aaKnown RBP10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 TMEM54Q969K7 222 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ZNF837Q96EG3 531 aaPredicted RBP10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 Q96M85 177 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 POLDIP3Q9BY77 421 aaKnown RBP10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 LINC00470Q9BZP3 86 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 PARPBPQ9NWS1 579 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 IL20Q9NYY1 176 aa10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 KLF2Q9Y5W3 355 aaPredicted RBP10.94□□□□□ -0.66
HLA-DQB1-203ENST00000399082 IGKV1D-43A0A0B4J1Z2 117 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 TEX13CA0A0J9YWL9 993 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 G3V2T6 193 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 BHLHE40O14503 412 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 SLC43A1O75387 559 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 CNOT4O95628 575 aaKnown RBP10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 TXNDC12O95881 172 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 BCL10O95999 233 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ANXA8P13928 327 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 GSTM3P21266 225 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 CD79BP40259 229 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 FAPQ12884 760 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 SNTB1Q13884 538 aaKnown RBP10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 RCN1Q15293 331 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 HIST3H3Q16695 136 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 KDM4DQ6B0I6 523 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 DPY19L2P2Q6ZN68 376 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 BEND4Q6ZU67 534 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 C22orf34Q6ZV56 151 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 PTCHD4Q6ZW05 846 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ZNF771Q7L3S4 317 aaPredicted RBP10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 STK32CQ86UX6 486 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 CXorf67Q86X51 503 aaPredicted RBP10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ZDHHC13Q8IUH4 622 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 C10orf67Q8IYJ2 551 aa10.93□□□□□ -0.66
HLA-DQB1-203ENST00000399082 ARIH2OSQ8N7S6 290 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms