RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 LRRC58Q96CX6 371 aa6.72□□□□□ -1.33
CASP4-201ENST00000393150 OTUB1Q96FW1 271 aaPredicted RBP6.72□□□□□ -1.33
CASP4-201ENST00000393150 ZNF764Q96H86 408 aaPredicted RBP6.72□□□□□ -1.33
CASP4-201ENST00000393150 C1QTNF3Q9BXJ4 246 aa6.72□□□□□ -1.33
CASP4-201ENST00000393150 TSPYL1Q9H0U9 437 aa6.72□□□□□ -1.33
CASP4-201ENST00000393150 ATAD3AQ9NVI7 634 aa6.72□□□□□ -1.33
CASP4-201ENST00000393150 SLCO1C1Q9NYB5 712 aa6.72□□□□□ -1.33
CASP4-201ENST00000393150 UBAP1Q9NZ09 502 aa6.72□□□□□ -1.33
CASP4-201ENST00000393150 PPP2R2CQ9Y2T4 447 aa6.72□□□□□ -1.33
CASP4-201ENST00000393150 PPIAL4EA0A075B759 164 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 PPIAL4CA0A0B4J2A2 164 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 IGHV1-69-2A0A0G2JMI3 117 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 A8MT66 165 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 PPIAL4DF5H284 164 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 SLC28A1O00337 649 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 NR5A2O00482 541 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 PPP6CO00743 305 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 CFLARO15519 480 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 RAB36O95755 333 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 CHEK2O96017 543 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 PPIAL4FP0DN26 164 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 IMPDH1P20839 514 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 OMGP23515 440 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 CXCR1P25024 350 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 CASQ1P31415 396 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 PLTPP55058 493 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 RAG2P55895 527 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 TUBA1BP68363 451 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 TUBA4AP68366 448 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 PRKDCP78527 4128 aaKnown RBP6.71□□□□□ -1.34
CASP4-201ENST00000393150 LCN2P80188 198 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 HPCAP84074 193 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 ROR2Q01974 943 aaKnown RBP6.71□□□□□ -1.34
CASP4-201ENST00000393150 C2orf68Q2NKX9 166 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 CFAP157Q5JU67 520 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 VAX1Q5SQQ9 334 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 FAM205BPQ63HN1 556 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 NIPAL3Q6P499 406 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 TUBA1AQ71U36 451 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 RPS27LQ71UM5 84 aaKnown RBP6.71□□□□□ -1.34
CASP4-201ENST00000393150 CARM1Q86X55 608 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 WDFY1Q8IWB7 410 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 KIR3DL3Q8N743 410 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 MTERF3Q96E29 417 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 CCDC126Q96EE4 140 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 FAM120BQ96EK7 910 aaKnown RBP6.71□□□□□ -1.34
CASP4-201ENST00000393150 DNAJA3Q96EY1 480 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 GIMAP5Q96F15 307 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 ELMOD3Q96FG2 381 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 RBM4BQ9BQ04 359 aaKnown RBP6.71□□□□□ -1.34
CASP4-201ENST00000393150 KLHDC3Q9BQ90 382 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 ERP44Q9BS26 406 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 CCDC106Q9BWC9 280 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 RSPO3Q9BXY4 272 aaPredicted RBP6.71□□□□□ -1.34
CASP4-201ENST00000393150 MRPL37Q9BZE1 423 aaKnown RBP6.71□□□□□ -1.34
CASP4-201ENST00000393150 EGLN1Q9GZT9 426 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 DPH5Q9H2P9 285 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 DENND2DQ9H6A0 471 aaPredicted RBP6.71□□□□□ -1.34
CASP4-201ENST00000393150 NOX3Q9HBY0 568 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 MID1IP1Q9NPA3 183 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 B3GAT2Q9NPZ5 323 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 HINT3Q9NQE9 182 aaKnown RBP6.71□□□□□ -1.34
CASP4-201ENST00000393150 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.71□□□□□ -1.34
CASP4-201ENST00000393150 KIF17Q9P2E2 1029 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 ZDHHC2Q9UIJ5 367 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 TIMM22Q9Y584 194 aa6.71□□□□□ -1.34
CASP4-201ENST00000393150 V9GYY5 206 aaPredicted RBP6.71□□□□□ -1.34
CASP4-201ENST00000393150 TMED7-TICAM2A0A0A6YYA0 188 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 CLPSL1A2RUU4 121 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 TMEM114B3SHH9 223 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 TBX19O60806 448 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 SLC43A1O75387 559 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 IGHV2-5P01817 119 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 MYZAPP0CAP1 466 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 CD79AP11912 226 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 ZNF43P17038 809 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 ATP5F1P24539 256 aaPredicted RBP6.7□□□□□ -1.34
CASP4-201ENST00000393150 IDH2P48735 452 aaKnown RBP6.7□□□□□ -1.34
CASP4-201ENST00000393150 COPZ1P61923 177 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 H3F3AP84243 136 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 SKP2Q13309 424 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 C1DQ13901 141 aaKnown RBP6.7□□□□□ -1.34
CASP4-201ENST00000393150 SLC9A3R2Q15599 337 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 OR7A5Q15622 319 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 GSG1Q2KHT4 349 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 ZNF678Q5SXM1 525 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 AVPI1Q5T686 147 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 PRAMEF8Q5VWM4 474 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 PRAMEF7Q5VXH5 474 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 ANKRD26P1Q6NSI1 321 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 BTNL3Q6UXE8 466 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 UNQ6126/PRO20091Q6UXV3 157 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 SLC35F6Q8N357 371 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 PRR18Q8N4B5 295 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 CCNYL1Q8N7R7 359 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 OR52E2Q8NGJ4 325 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 C11orf40Q8WZ69 217 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 OR5P2Q8WZ92 322 aa6.7□□□□□ -1.34
CASP4-201ENST00000393150 DVL3Q92997 716 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms