RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 DDOQ99489 341 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 A6NL46 340 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 BET1O15155 118 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 UTS2O95399 124 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 SIX6O95475 246 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 HTR5AP47898 357 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 RPL34P49207 117 aaKnown RBP12.11□□□□□ -0.47
LCA5-202ENST00000392959 HIST2H3PS2Q5TEC6 136 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 MISPQ8IVT2 679 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 ADGRF3Q8IZF5 1079 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 ZNF578Q96N58 590 aaPredicted RBP12.11□□□□□ -0.47
LCA5-202ENST00000392959 SLC46A1Q96NT5 459 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 ARHGAP9Q9BRR9 750 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 OCEL1Q9H607 264 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 SERTAD4Q9NUC0 356 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 LOC100289279A0A1B0GTE1 492 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 TCRBV5S2A0A599 114 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 ZAR1LA6NP61 321 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 D6RAR5 112 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 P2RY10O00398 339 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 CTNSO60931 367 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 ELK1P19419 428 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 CPT2P23786 658 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 HOXA9P31269 272 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 TRHRP34981 398 aaPredicted RBP12.11□□□□□ -0.47
LCA5-202ENST00000392959 ZNF93P35789 620 aaPredicted RBP12.11□□□□□ -0.47
LCA5-202ENST00000392959 SLC6A12P48065 614 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 MRPS21P82921 87 aaKnown RBP12.11□□□□□ -0.47
LCA5-202ENST00000392959 ZNF836Q6ZNA1 936 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 PGAP1Q75T13 922 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 FAM122BQ7Z309 247 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 KDM8Q8N371 416 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 FAM213BQ8TBF2 198 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 RASD2Q96D21 266 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 ARID1AO14497 2285 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 ANKRD34BA5PLL1 514 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 ZNF780AO75290 641 aaPredicted RBP12.11□□□□□ -0.47
LCA5-202ENST00000392959 ABLIM3O94929 683 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 MSR1P21757 451 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 SRP9P49458 86 aaKnown RBP12.11□□□□□ -0.47
LCA5-202ENST00000392959 SOHLH1Q5JUK2 328 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 HEPHL1Q6MZM0 1159 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 LINC00346Q8IVM7 164 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 PLPP5Q8NEB5 264 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 CPT1CQ8TCG5 803 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 HDAC8Q9BY41 377 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 HINT3Q9NQE9 182 aaKnown RBP12.11□□□□□ -0.47
LCA5-202ENST00000392959 DUSP22Q9NRW4 184 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 TM7SF3Q9NS93 570 aa12.11□□□□□ -0.47
LCA5-202ENST00000392959 NSG1A0A0A6YYJ2 146 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 LRIT2A6NDA9 550 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 SHOXO15266 292 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 DOK2O60496 412 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 ALX3O95076 343 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 NAGAP17050 411 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 CNR1P21554 472 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 RAB5CP51148 216 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 DUSP6Q16828 381 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 IAH1Q2TAA2 248 aaPredicted RBP12.1□□□□□ -0.47
LCA5-202ENST00000392959 PAQR6Q6TCH4 344 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 KIAA0907Q7Z7F0 614 aaPredicted RBP12.1□□□□□ -0.47
LCA5-202ENST00000392959 ADGRE4PQ86SQ3 457 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 LRRC18Q8N456 261 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 NKAIN3Q8N8D7 197 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 PLPP7Q8NBV4 271 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 LRRC46Q96FV0 321 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 ZNF416Q9BWM5 594 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.1□□□□□ -0.47
LCA5-202ENST00000392959 NUP205Q92621 2012 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 GABARAPH6UMI1 98 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 NID1P14543 1247 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 HMGA1P17096 107 aaKnown RBP12.1□□□□□ -0.47
LCA5-202ENST00000392959 BIDP55957 195 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 C17orf67Q0P5P2 114 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 IHHQ14623 411 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 DUSP5Q16690 384 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 SAXO2Q658L1 398 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 CMIPQ8IY22 773 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 NAT6Q93015 286 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 TAAR8Q969N4 342 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 ZNF775Q96BV0 537 aaPredicted RBP12.1□□□□□ -0.47
LCA5-202ENST00000392959 ELF4Q99607 663 aaPredicted RBP12.1□□□□□ -0.47
LCA5-202ENST00000392959 NDUFB11Q9NX14 153 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 MED16Q9Y2X0 877 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 KLK8O60259 260 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 IGFBP1P08833 259 aaPredicted RBP12.1□□□□□ -0.47
LCA5-202ENST00000392959 CLDN17P56750 224 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 ERVFC1P60507 584 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 HMGN3Q15651 99 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 TMEM52BQ4KMG9 183 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 PDLIM3Q53GG5 364 aaPredicted RBP12.1□□□□□ -0.47
LCA5-202ENST00000392959 LIPNQ5VXI9 398 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 MDGA2Q7Z553 956 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 OR10R2Q8NGX6 335 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 SCARB1Q8WTV0 552 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 MED30Q96HR3 178 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 ARL5BQ96KC2 179 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 HAO2Q9NYQ3 351 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 RAB22AQ9UL26 194 aa12.1□□□□□ -0.47
LCA5-202ENST00000392959 CRYBG1Q9Y4K1 1723 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms