RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TREM2Q9NZC2 230 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 STX18Q9P2W9 335 aaKnown RBP1.58□□□□□ -2.16
TRAV40-201ENST00000390467 PEF1Q9UBV8 284 aaKnown RBP1.58□□□□□ -2.16
TRAV40-201ENST00000390467 CHRNA9Q9UGM1 479 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 DDX19BQ9UMR2 479 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 SLC22A14Q9Y267 594 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 TRAPPC4Q9Y296 219 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 MFHAS1Q9Y4C4 1052 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 TIMM22Q9Y584 194 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 PLEKHH1Q9ULM0 1364 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 KIF27Q86VH2 1401 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 IGHV3OR16-13A0A075B7E8 117 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 A0A0U1RQV5 110 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 IQANK1A0A1B0GTG1 560 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 SUPT3HB4E1H0 165 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 WASH3PC4AMC7 463 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 PSMD11O00231 422 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 TRAPPC3O43617 180 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 N4BP1O75113 896 aaKnown RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 ZNF189O75820 626 aaPredicted RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 RBBP9O75884 186 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 CLPXO76031 633 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 MYO1DO94832 1006 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 ERLIN2O94905 339 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 LALBAP00709 142 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 PABPC4LP0CB38 370 aaKnown RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 CALCBP10092 127 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 RNH1P13489 461 aaKnown RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 RPA2P15927 270 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 PRKACAP17612 351 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 CELP19835 753 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 NCF2P19878 526 aaPredicted RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 UQCRC2P22695 453 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 TUBG1P23258 451 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 CD80P33681 288 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 RORAP35398 523 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 CYLC1P35663 651 aaPredicted RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 ATP5C1P36542 298 aaKnown RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 GPR4P46093 362 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 KLK7P49862 253 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 AIF1P55008 147 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 GPX6P59796 221 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 VBP1P61758 197 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 TSPAN5P62079 268 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 ACTA2P62736 377 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 ACTC1P68032 377 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 NTHL1P78549 312 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 CHRNB3Q05901 458 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 ZNF763Q0D2J5 394 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 PDK3Q15120 406 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 SNCBQ16143 134 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 PDK4Q16654 411 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 MAPK6Q16659 721 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 RGS21Q2M5E4 152 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 HNRNPA1L2Q32P51 320 aaKnown RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 ADPRMQ3LIE5 342 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 CHRFAM7AQ494W8 412 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 USH1GQ495M9 461 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 HIKESHIQ53FT3 197 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 TMEM41BQ5BJD5 291 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 C1orf100Q5SVJ3 147 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 LRRC66Q68CR7 880 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 PTRHD1Q6GMV3 140 aaKnown RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 CTRB2Q6GPI1 263 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 TTC23LQ6PF05 361 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 SLC25A34Q6PIV7 304 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 WASH2PQ6VEQ5 465 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 ZNF621Q6ZSS3 439 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 TPGS1Q6ZTW0 290 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 NCCRP1Q6ZVX7 275 aaPredicted RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 USP50Q70EL3 339 aaPredicted RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 NANOGNBQ7Z5D8 188 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 HMGN2P46Q86SG4 172 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 CDR2LQ86X02 465 aaPredicted RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 LRRC6Q86X45 466 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 KATNAL2Q8IYT4 538 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 MINDY2Q8NBR6 621 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 OR52B4Q8NGK2 314 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 CCDC12Q8WUD4 166 aaPredicted RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 SCFD1Q8WVM8 642 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 ASZ1Q8WWH4 475 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 PIBF1Q8WXW3 757 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 FRZBQ92765 325 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 SLC35B4Q969S0 331 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 KIAA1143Q96AT1 154 aaPredicted RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 TRNT1Q96Q11 434 aaKnown RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 ALS2CR12Q96Q35 445 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 CYTH2Q99418 400 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 GPA33Q99795 319 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 SPIN2AQ99865 258 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 SPIN2BQ9BPZ2 258 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 KCNS3Q9BQ31 491 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 C11orf70Q9BRQ4 267 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 NUP58Q9BVL2 599 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 PKIBQ9C010 78 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 OR11A1Q9GZK7 315 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 TMEM231Q9H6L2 316 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 FN3KRPQ9HA64 309 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 PLGRKTQ9HBL7 147 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 MRM3Q9HC36 420 aaKnown RBP1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms