RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 NPIPB4C9JG80 1138 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 SNX4O95219 450 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 FKBP2P26885 142 aaKnown RBP22.69■■□□□ 1.22
SHOX2-201ENST00000389589 DDI2Q5TDH0 399 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 PAMR1Q6UXH9 720 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 CDC20BQ86Y33 519 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 WDSUB1Q8N9V3 476 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 CHST11Q9NPF2 352 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 ALKBH4Q9NXW9 302 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 GRIP1Q9Y3R0 1128 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 A6NIZ1 184 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 MS4A18H0YCH9 400 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 FZD7O75084 574 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 SC5DO75845 299 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 TACSTD2P09758 323 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 OCM2P0CE71 109 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 OCMP0CE72 109 aaPredicted RBP22.69■■□□□ 1.22
SHOX2-201ENST00000389589 ADH6P28332 368 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 OTX2P32243 289 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 RAP1BP61224 184 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 RAP1AP62834 184 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 MS4A18Q3C1V0 323 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 TMEM164Q5U3C3 297 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 C3orf33Q6P1S2 294 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 SNX29P2Q8IUI4 249 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 ADAD1Q96M93 576 aaKnown RBP22.69■■□□□ 1.22
SHOX2-201ENST00000389589 KLHL15Q96M94 604 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 ANGPTL4Q9BY76 406 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 FBXL2Q9UKC9 423 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 PCDHGA1Q9Y5H4 931 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 TMEM14AQ9Y6G1 99 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 PMS2P1A4D2B8 440 aa22.68■■□□□ 1.22
SHOX2-201ENST00000389589 LIPT2A6NK58 231 aa22.68■■□□□ 1.22
SHOX2-201ENST00000389589 MAGEB4O15481 346 aaPredicted RBP22.68■■□□□ 1.22
SHOX2-201ENST00000389589 MT-CO3P00414 261 aa22.68■■□□□ 1.22
SHOX2-201ENST00000389589 HPP00738 406 aa22.68■■□□□ 1.22
SHOX2-201ENST00000389589 GDI2P50395 445 aaKnown RBP22.68■■□□□ 1.22
SHOX2-201ENST00000389589 RPS15P62841 145 aaKnown RBP22.68■■□□□ 1.22
SHOX2-201ENST00000389589 MRPL28Q13084 256 aaKnown RBP22.68■■□□□ 1.22
SHOX2-201ENST00000389589 TRIM16LQ309B1 348 aa22.68■■□□□ 1.22
SHOX2-201ENST00000389589 ZNF684Q5T5D7 378 aa22.68■■□□□ 1.22
SHOX2-201ENST00000389589 TMEM156Q8N614 296 aa22.68■■□□□ 1.22
SHOX2-201ENST00000389589 TEX19Q8NA77 164 aa22.68■■□□□ 1.22
SHOX2-201ENST00000389589 ZBTB8AQ96BR9 441 aa22.68■■□□□ 1.22
SHOX2-201ENST00000389589 INTS14Q96SY0 518 aa22.68■■□□□ 1.22
SHOX2-201ENST00000389589 WDR76Q9H967 626 aa22.68■■□□□ 1.22
SHOX2-201ENST00000389589 ACOXLQ9NUZ1 547 aa22.68■■□□□ 1.22
SHOX2-201ENST00000389589 B9D1Q9UPM9 204 aa22.68■■□□□ 1.22
SHOX2-201ENST00000389589 B3GALT5Q9Y2C3 310 aa22.68■■□□□ 1.22
SHOX2-201ENST00000389589 SDK2Q58EX2 2172 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 A0A087WZY1 265 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 C9orf172C9J069 976 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 EFNA2O43921 213 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 IMPDH2P12268 514 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 IL11P20809 199 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 DAP3P51398 398 aaKnown RBP22.67■■□□□ 1.22
SHOX2-201ENST00000389589 RPS18P62269 152 aaKnown RBP22.67■■□□□ 1.22
SHOX2-201ENST00000389589 TLE3Q04726 772 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 OXA1LQ15070 435 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 PRAMEF20Q5VT98 475 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 CEACAM19Q7Z692 300 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 PXKQ7Z7A4 578 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 PLCZ1Q86YW0 608 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 LAX1Q8IWV1 398 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 PAQR8Q8TEZ7 354 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 CCDC32Q9BV29 185 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 ABCB10Q9NRK6 738 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 FAIMQ9NVQ4 179 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 TBCCD1Q9NVR7 557 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 TRBV2A0A0J9YWF9 115 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 SHISA3A0PJX4 238 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 SHISA8B8ZZ34 492 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 H3BML4 177 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 PHYHO14832 338 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 EDNRAP25101 427 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 CHAF1BQ13112 559 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 INPP5JQ15735 1006 aaPredicted RBP22.67■■□□□ 1.22
SHOX2-201ENST00000389589 FAM205BPQ63HN1 556 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 FAM220AQ7Z4H9 259 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 TPRA1Q86W33 373 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 SLC25A43Q8WUT9 341 aaPredicted RBP22.67■■□□□ 1.22
SHOX2-201ENST00000389589 ABCB9Q9NP78 766 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 FANCFQ9NPI8 374 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 LAMP5Q9UJQ1 280 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 TRAPPC4Q9Y296 219 aa22.67■■□□□ 1.22
SHOX2-201ENST00000389589 SLC22A23A1A5C7 686 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 TVP23AA6NH52 213 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 TBX1O43435 398 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 GPRIN2O60269 458 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 MYL9P24844 172 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 NUBP1P53384 320 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 ACSM3Q53FZ2 586 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 SLC22A10Q63ZE4 541 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 LYSMD2Q8IV50 215 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 ESX1Q8N693 406 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 SH2D2AQ9NP31 389 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 HPF1Q9NWY4 346 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 SMIM30A4D0T7 59 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 NPIPA5E9PKD4 350 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 CRABP1P29762 137 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms