RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 ZNF222Q9UK12 451 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 CCL27Q9Y4X3 112 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 MAB21L2Q9Y586 359 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 FAM215AQ9Y5M1 114 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 TULP4Q9NRJ4 1543 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 PTPRSQ13332 1948 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 ZGRF1Q86YA3 2104 aa-1.58□□□□□ -2.66
RNU6-540P-201ENST00000384622 PLEKHH1Q9ULM0 1364 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 XIRP1Q702N8 1843 aaKnown RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 UNC13BO14795 1591 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 GOLGA8QA0A0J9YX86 632 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 LOC102725191A0A1B0GVB3 256 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 FEZF1A0PJY2 475 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 GOLGA8OA6NCC3 632 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 ARGFXA6NJG6 315 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 GOLGA8NF8WBI6 632 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 SULT2B1O00204 365 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 CDC7O00311 574 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLC17A2O00624 439 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 FFAR1O14842 300 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 OGG1O15527 345 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 JAK2O60674 1132 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 CSDE1O75534 798 aaKnown RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 REM1O75628 298 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 SNRNP200O75643 2136 aaKnown RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 ADAP1O75689 374 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 B3GAT3O94766 335 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 NUDT14O95848 222 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 C2P06681 752 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 PNMA6AP0CW24 399 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 NT5EP21589 574 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 IVDP26440 423 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 PRDX3P30048 256 aaKnown RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR1E2P47887 323 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 REG1BP48304 166 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 NDUFA8P51970 172 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 RAD23AP54725 363 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 FGF8P55075 233 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 FBXW4P57775 412 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLC34A1Q06495 639 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 TWF1Q12792 350 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 PPP2R5CQ13362 524 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 GRM3Q14832 879 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 ANGPT1Q15389 498 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 TAL2Q16559 108 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 RABGAP1LQ5R372 815 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 LDLRAD2Q5SZI1 272 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 PVRIGQ6DKI7 326 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 UNQ9165/PRO28630Q6UXU0 137 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 ACP7Q6ZNF0 438 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 MIER3Q7Z3K6 550 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 DHDDSQ86SQ9 333 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 SNX32Q86XE0 403 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 BOD1L2Q8IYS8 172 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 TTC30BQ8N4P2 665 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 FAM86B1Q8N7N1 296 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 SIDT2Q8NBJ9 832 aaKnown RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR4E2Q8NGC2 313 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR10D4PQ8NGN7 298 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 SCFD2Q8WU76 684 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 RNF133Q8WVZ7 376 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 BSCL2Q96G97 398 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 PRMT1Q99873 361 aaKnown RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 NAA50Q9GZZ1 169 aaKnown RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 RNF41Q9H4P4 317 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 KAT8Q9H7Z6 458 aaKnown RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 GPN2Q9H9Y4 310 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 TREM1Q9NP99 234 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 RPRD1BQ9NQG5 326 aaKnown RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 EIF2B3Q9NR50 452 aaKnown RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 PAG1Q9NWQ8 432 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 ADA2Q9NZK5 511 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 PCSK1NQ9UHG2 260 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 XPO7Q9UIA9 1087 aaKnown RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 RPUSD1Q9UJJ7 312 aaKnown RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 SIGLEC9Q9Y336 463 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 URGCP-MRPS24S4R325 110 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 NYNRINQ9P2P1 1898 aaKnown RBP-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 ATRNO75882 1429 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 ATP10DQ9P241 1426 aa-1.59□□□□□ -2.66
RNU6-540P-201ENST00000384622 PTPRFP10586 1907 aa-1.6□□□□□ -2.66
RNU6-540P-201ENST00000384622 ARHGEF12Q9NZN5 1544 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 CLSPNQ9HAW4 1339 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 A0A1W2PRD5 423 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 GOLGA8IPA6NC78 632 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 GOLGA8MH3BSY2 632 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 H7C417 338 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 SLC16A4O15374 487 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 COCHO43405 550 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 GUCY1B2O75343 617 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 BEST1O76090 585 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 AQP8O94778 261 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 NOL4O94818 638 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZWINTO95229 277 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 IGHV3-9P01782 118 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 ATP5G1P05496 136 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 IFIT2P09913 472 aaKnown RBP-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 IRF2P14316 349 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 CALML3P27482 149 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 RPL4P36578 427 aaKnown RBP-1.6□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms