RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 LANCL2Q9NS86 450 aa13.78□□□□□ -0.2
VLDLR-202ENST00000382099 CSAG2Q9Y5P2 127 aa13.78□□□□□ -0.2
VLDLR-202ENST00000382099 MYADML2A6NDP7 307 aa13.77□□□□□ -0.2
VLDLR-202ENST00000382099 IFITM5A6NNB3 132 aa13.77□□□□□ -0.2
VLDLR-202ENST00000382099 M0QYG6 137 aa13.77□□□□□ -0.2
VLDLR-202ENST00000382099 PMS2P2O95744 297 aa13.77□□□□□ -0.2
VLDLR-202ENST00000382099 AKAIN1P0CW23 69 aa13.77□□□□□ -0.2
VLDLR-202ENST00000382099 MST1LQ2TV78 715 aa13.77□□□□□ -0.2
VLDLR-202ENST00000382099 CD300LDQ6UXZ3 194 aa13.77□□□□□ -0.2
VLDLR-202ENST00000382099 MEPCEQ7L2J0 689 aaKnown RBP13.77□□□□□ -0.2
VLDLR-202ENST00000382099 FAM219AQ8IW50 185 aa13.77□□□□□ -0.2
VLDLR-202ENST00000382099 OR2M4Q96R27 311 aa13.77□□□□□ -0.2
VLDLR-202ENST00000382099 NRIP3Q9NQ35 241 aa13.77□□□□□ -0.2
VLDLR-202ENST00000382099 SEMA4GQ9NTN9 838 aa13.77□□□□□ -0.2
VLDLR-202ENST00000382099 OR5H15A6NDH6 313 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 OR5H1A6NKK0 313 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 MFNGO00587 321 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 LRP3O75074 770 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 FURINP09958 794 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 CD200P41217 278 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 RAP1AP62834 184 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 C4orf17Q53FE4 359 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 STPG1Q5TH74 334 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 THOC6Q86W42 341 aaKnown RBP13.77□□□□□ -0.21
VLDLR-202ENST00000382099 THNSL2Q86YJ6 484 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 LINC00471Q8N535 108 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 ZCCHC10Q8TBK6 192 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 FOXRED1Q96CU9 486 aaPredicted RBP13.77□□□□□ -0.21
VLDLR-202ENST00000382099 UPB1Q9UBR1 384 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 CHRNA9Q9UGM1 479 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 PUS1Q9Y606 427 aaKnown RBP eCLIP13.77□□□□□ -0.21
VLDLR-202ENST00000382099 TRAV1-2A0A0B4J238 106 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 A6NNC1 897 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 B3GAT3O94766 335 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 PPP1R3DO95685 299 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 SOD3P08294 240 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 CLUP10909 449 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 ELNP15502 786 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 BMP7P18075 431 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 SRMP19623 302 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 NT5EP21589 574 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 PTGER1P34995 402 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 LPAR6P43657 344 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 DHPSP49366 369 aaPredicted RBP13.77□□□□□ -0.21
VLDLR-202ENST00000382099 AFF3P51826 1226 aaKnown RBP13.77□□□□□ -0.21
VLDLR-202ENST00000382099 SLC35D3Q5M8T2 416 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 C19orf47Q8N9M1 422 aaKnown RBP13.77□□□□□ -0.21
VLDLR-202ENST00000382099 OR10AD1Q8NGE0 317 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 TAAR9Q96RI9 348 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 ADAM2Q99965 735 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 NDUFAF3Q9BU61 184 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 TCEAL2Q9H3H9 227 aaPredicted RBP13.77□□□□□ -0.21
VLDLR-202ENST00000382099 C19orf12Q9NSK7 152 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 OR14J1Q9UGF5 321 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 ZMIZ1Q9ULJ6 1067 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 AMDHD2Q9Y303 409 aa13.77□□□□□ -0.21
VLDLR-202ENST00000382099 MRPS23Q9Y3D9 190 aaKnown RBP13.77□□□□□ -0.21
VLDLR-202ENST00000382099 TRAV18A0A075B6X5 111 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 AMY2AP04746 511 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 CHRM4P08173 479 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 PRKAR2AP13861 404 aaKnown RBP13.76□□□□□ -0.21
VLDLR-202ENST00000382099 PPP2R1BP30154 601 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 SOX2P48431 317 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 RNASE10Q5GAN6 216 aaKnown RBP13.76□□□□□ -0.21
VLDLR-202ENST00000382099 ZNF836Q6ZNA1 936 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 LANCL3Q6ZV70 420 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 GID4Q8IVV7 300 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 ZNF610Q8N9Z0 462 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 EID2BQ96D98 161 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 OR5V1Q9UGF6 321 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 FOXE1O00358 373 aaPredicted RBP13.76□□□□□ -0.21
VLDLR-202ENST00000382099 ZNF432O94892 652 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 FUT1P19526 365 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 PNLIPRP1P54315 467 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 SKP1P63208 163 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 DHRS2Q13268 280 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 PRSS53Q2L4Q9 553 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 VRK3Q8IV63 474 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 SLC35F3Q8IY50 421 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 OR51L1Q8NGJ5 315 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 C16orf78Q8WTQ4 265 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 PRRC1Q96M27 445 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 PACRGQ96M98 296 aaPredicted RBP13.76□□□□□ -0.21
VLDLR-202ENST00000382099 TEX101Q9BY14 249 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 DUSP15Q9H1R2 295 aaPredicted RBP13.76□□□□□ -0.21
VLDLR-202ENST00000382099 GNG8Q9UK08 70 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 NTNG1Q9Y2I2 539 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 ADAM18Q9Y3Q7 739 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 V9GY05 133 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 A0A0C4DFX4 3053 aa13.76□□□□□ -0.21
VLDLR-202ENST00000382099 PQBP1O60828 265 aaKnown RBP13.75□□□□□ -0.21
VLDLR-202ENST00000382099 TMEM11P17152 192 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 CR2P20023 1033 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 MAOAP21397 527 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 MECP2P51608 486 aaKnown RBP13.75□□□□□ -0.21
VLDLR-202ENST00000382099 SLC26A5P58743 744 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 UPP1Q16831 310 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 C10orf120Q5SQS8 335 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 TMPRSS11FQ6ZWK6 438 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 TMPRSS12Q86WS5 348 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms