RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 HSPB2A8KAH6 182 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 PDCD5O14737 125 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 MAGEB4O15481 346 aaPredicted RBP19.5■□□□□ 0.71
TRIM54-202ENST00000380075 FADS1O60427 444 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 F13BP05160 661 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 FAM157BP0CG42 384 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 EPXP11678 715 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 EVI2BP34910 448 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 EFR3AQ14156 821 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 HSPB2Q16082 182 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 SLC25A35Q3KQZ1 300 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 MESTQ5EB52 335 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 TIGD4Q8IY51 512 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 CTSFQ9UBX1 484 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 CNOT1A5YKK6 2376 aaKnown RBP19.5■□□□□ 0.71
TRIM54-202ENST00000380075 PHYHO14832 338 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 TRIM3O75382 744 aaPredicted RBP19.5■□□□□ 0.71
TRIM54-202ENST00000380075 NUDT14O95848 222 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 SGCBQ16585 318 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 NCCRP1Q6ZVX7 275 aaPredicted RBP19.5■□□□□ 0.71
TRIM54-202ENST00000380075 CDC20BQ86Y33 519 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 STT3BQ8TCJ2 826 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 WACQ9BTA9 647 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 SEMA4CQ9C0C4 833 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 PCDHGA1Q9Y5H4 931 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 TMEM14AQ9Y6G1 99 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 RP1P56715 2156 aa19.49■□□□□ 0.71
TRIM54-202ENST00000380075 FZD7O75084 574 aa19.49■□□□□ 0.71
TRIM54-202ENST00000380075 PITPNAQ00169 270 aa19.49■□□□□ 0.71
TRIM54-202ENST00000380075 ATAD3CQ5T2N8 411 aa19.49■□□□□ 0.71
TRIM54-202ENST00000380075 EEF1A1P5Q5VTE0 462 aa19.49■□□□□ 0.71
TRIM54-202ENST00000380075 ZNF57Q68EA5 555 aaPredicted RBP19.49■□□□□ 0.71
TRIM54-202ENST00000380075 IL20RBQ6UXL0 311 aa19.49■□□□□ 0.71
TRIM54-202ENST00000380075 GRINAQ7Z429 371 aa19.49■□□□□ 0.71
TRIM54-202ENST00000380075 ZNF511Q8NB15 262 aa19.49■□□□□ 0.71
TRIM54-202ENST00000380075 OR14A2Q96R54 314 aa19.49■□□□□ 0.71
TRIM54-202ENST00000380075 KLHDC3Q9BQ90 382 aa19.49■□□□□ 0.71
TRIM54-202ENST00000380075 HDHD2Q9H0R4 259 aa19.49■□□□□ 0.71
TRIM54-202ENST00000380075 NEK6Q9HC98 313 aa19.49■□□□□ 0.71
TRIM54-202ENST00000380075 ATXN7L1Q9ULK2 861 aaPredicted RBP19.49■□□□□ 0.71
TRIM54-202ENST00000380075 PSKH1P11801 424 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 CENPAP49450 140 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 CLDN6P56747 220 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 CLDN20P56880 219 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 SLC26A5P58743 744 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 CEP78Q5JTW2 689 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 FAM69AQ5T7M9 428 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 DHRS13Q6UX07 377 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 LANCL3Q6ZV70 420 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 STK35Q8TDR2 534 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 ADAD1Q96M93 576 aaKnown RBP19.48■□□□□ 0.71
TRIM54-202ENST00000380075 KLHL15Q96M94 604 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 CTRCQ99895 268 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 PDCD1LG2Q9BQ51 273 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 THAP7Q9BT49 309 aaPredicted RBP19.48■□□□□ 0.71
TRIM54-202ENST00000380075 SLC22A11Q9NSA0 550 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 ZNF346Q9UL40 294 aaKnown RBP19.48■□□□□ 0.71
TRIM54-202ENST00000380075 SPATA2Q9UM82 520 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 ADAMTS20P59510 1910 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 A8MVM7 634 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 NPIPB7O75200 414 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 DKK1O94907 266 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 ATF1P18846 271 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 MAPK3P27361 379 aaPredicted RBP19.48■□□□□ 0.71
TRIM54-202ENST00000380075 PSMB10P40306 273 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 RNF4P78317 190 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 EGR3Q06889 387 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 TOMM34Q15785 309 aaPredicted RBP19.48■□□□□ 0.71
TRIM54-202ENST00000380075 LYPD4Q6UWN0 246 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 TMPRSS9Q7Z410 1059 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 GPR119Q8TDV5 335 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 SLC7A6Q92536 515 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 TRIM63Q969Q1 353 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 ST6GAL2Q96JF0 529 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 MARVELD1Q9BSK0 173 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 WDR76Q9H967 626 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 TAS2R10Q9NYW0 307 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 POU2F3Q9UKI9 436 aa19.48■□□□□ 0.71
TRIM54-202ENST00000380075 TMED7-TICAM2A0A0A6YYA0 188 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 FAM171A2A8MVW0 826 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 XKRYO14609 159 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 SUSD5O60279 629 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 SLC43A1O75387 559 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 ITGA10O75578 1167 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 UBL3O95164 117 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 PAHP00439 452 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 PRKCAP17252 672 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 SRMP19623 302 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 BLVRAP53004 296 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 TBRG1Q3YBR2 411 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 OR6S1Q8NH40 331 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 ZNF486Q96H40 463 aaPredicted RBP19.47■□□□□ 0.71
TRIM54-202ENST00000380075 TSSK2Q96PF2 358 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 MRI1Q9BV20 369 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 PTDSS2Q9BVG9 487 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 OR2B2Q9GZK3 357 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 SRA1Q9HD15 236 aaKnown RBP19.47■□□□□ 0.71
TRIM54-202ENST00000380075 TAS2R5Q9NYW4 299 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 TMED7Q9Y3B3 224 aa19.47■□□□□ 0.71
TRIM54-202ENST00000380075 ARPC4-TTLL3A0A0A6YYG9 625 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms