RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 LRRC28Q86X40 367 aaPredicted RBP7□□□□□ -1.29
CDKL5-202ENST00000379996 GPALPP1Q8IXQ4 340 aa7□□□□□ -1.29
CDKL5-202ENST00000379996 LSMEM1Q8N8F7 131 aa7□□□□□ -1.29
CDKL5-202ENST00000379996 SLC37A3Q8NCC5 494 aa7□□□□□ -1.29
CDKL5-202ENST00000379996 TMEM239Q8WW34 195 aa7□□□□□ -1.29
CDKL5-202ENST00000379996 PAQR5Q9NXK6 330 aaPredicted RBP7□□□□□ -1.29
CDKL5-202ENST00000379996 COMMD3Q9UBI1 195 aa7□□□□□ -1.29
CDKL5-202ENST00000379996 PTRH2Q9Y3E5 179 aaKnown RBP7□□□□□ -1.29
CDKL5-202ENST00000379996 A0A0C4DFX4 3053 aa7□□□□□ -1.29
CDKL5-202ENST00000379996 WDR87Q6ZQQ6 2873 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 C12orf71A8MTZ7 269 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 CASKO14936 926 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 TMCC2O75069 709 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 PAHP00439 452 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 TFP02787 698 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 KRT8P05787 483 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 DBIP07108 87 aaKnown RBP6.99□□□□□ -1.29
CDKL5-202ENST00000379996 YES1P07947 543 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 ARSBP15848 533 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 TCN2P20062 427 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 DLSTP36957 453 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 OR10A3P58181 314 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 RRAS2P62070 204 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-202ENST00000379996 GPR176Q14439 515 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 EIPR1Q53HC9 387 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 FAM27D1Q5T7N8 215 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 ZNF468Q5VIY5 522 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-202ENST00000379996 FAAH2Q6GMR7 532 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 ZNF613Q6PF04 617 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 KIRREL2Q6UWL6 708 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 UNQ9370/PRO34162Q6UXP9 181 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 B3GLCTQ6Y288 498 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 C16orf62Q7Z3J2 963 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 SLC43A2Q8N370 569 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 C9orf62Q8N4C0 152 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 ZNRF4Q8WWF5 429 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 THAP4Q8WY91 577 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 TEAD3Q99594 435 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 LPAR4Q99677 370 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 TMEM246Q9BRR3 403 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 ZFP64Q9NPA5 681 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 TNFRSF10DQ9UBN6 386 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 COPS7AQ9UBW8 275 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 WDR45Q9Y484 360 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 CLCA3PQ9Y6N3 262 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 KIF26BQ2KJY2 2108 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 TRAV1-2A0A0B4J238 106 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 SBK2P0C263 348 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 RPS4XP62701 263 aaKnown RBP6.99□□□□□ -1.29
CDKL5-202ENST00000379996 CRMP1Q14194 572 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 RNFT1Q5M7Z0 435 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 PDZK1Q5T2W1 519 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 RPL13AP3Q6NVV1 102 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 SFXN4Q6P4A7 337 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 FAM199XQ6PEV8 388 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-202ENST00000379996 DNM1P46Q6ZS02 220 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 C1orf229Q6ZS94 237 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-202ENST00000379996 LANCL3Q6ZV70 420 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 SZRD1Q7Z422 152 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 TPRA1Q86W33 373 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 C9orf40Q8IXQ3 194 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 ACBD7Q8N6N7 88 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 OR11G2Q8NGC1 345 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 OR5L2Q8NGL0 311 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 C16orf52Q8NHV5 167 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 GPR137Q96N19 417 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 ABHD1Q96SE0 405 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 GON7Q9BXV9 100 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 NMNAT2Q9BZQ4 307 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 WWTR1Q9GZV5 400 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 FBXL4Q9UKA2 621 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 KLK13Q9UKR3 277 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 ERVK-19Q9WJR5 959 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 TFECO14948 347 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-202ENST00000379996 CHP2O43745 196 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 CDC123O75794 336 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-202ENST00000379996 ADRB1P08588 477 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 CT45A8P0DMV1 189 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 CT45A9P0DMV2 189 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 CLUP10909 449 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 SHC1P29353 583 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 ZNHIT3Q15649 155 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-202ENST00000379996 CCDC157Q569K6 752 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 CT45A2Q5DJT8 189 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 C6orf183Q5T699 404 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 PAPD4Q6PIY7 484 aaKnown RBP6.99□□□□□ -1.29
CDKL5-202ENST00000379996 EXD3Q8N9H8 876 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 OR51G2Q8NGK0 314 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 OR13C2Q8NGS9 318 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 OR5J2Q8NH18 312 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 OR5W2Q8NH69 310 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 TTC9Q92623 222 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 G6PC3Q9BUM1 346 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 NUDT9Q9BW91 350 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 HEXA-AS1Q9H8Q6 139 aa6.99□□□□□ -1.29
CDKL5-202ENST00000379996 ZNF275Q9NSD4 429 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-202ENST00000379996 H2AFY2Q9P0M6 372 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-202ENST00000379996 LOC100289279A0A1B0GTE1 492 aa6.98□□□□□ -1.29
CDKL5-202ENST00000379996 TEX51A0A1B0GUA7 166 aa6.98□□□□□ -1.29
CDKL5-202ENST00000379996 TMEM200CA6NKL6 621 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms