RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 SPEM1Q8N4L4 309 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 SPIN2AQ99865 258 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 SPIN2BQ9BPZ2 258 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 PIGQQ9BRB3 760 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 EIF5A2Q9GZV4 153 aaKnown RBP12.52□□□□□ -0.41
C9orf47-203ENST00000375851 NIPAL2Q9H841 368 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 SMCO3A2RU48 225 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 B4DXG7 233 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 H7C2Y5 167 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 PSMB1P20618 241 aaKnown RBP12.52□□□□□ -0.41
C9orf47-203ENST00000375851 EFNA3P52797 238 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 MTCP1P56278 107 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 CARD18P57730 90 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 SLC14A1Q13336 389 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 FAM53BQ14153 422 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 TRAPPC6BQ86SZ2 158 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 DCUN1D4Q92564 292 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 OR2M2Q96R28 347 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 CMC2Q9NRP2 79 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 DNAJB11Q9UBS4 358 aa12.52□□□□□ -0.41
C9orf47-203ENST00000375851 POLR2AP24928 1970 aaKnown RBP12.52□□□□□ -0.41
C9orf47-203ENST00000375851 M0R082 166 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 P2RY10O00398 339 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 KIAA0040Q15053 153 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 YIF1BQ5BJH7 314 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 HAGHLQ6PII5 290 aaPredicted RBP12.51□□□□□ -0.41
C9orf47-203ENST00000375851 PAPOLGQ9BWT3 736 aaKnown RBP12.51□□□□□ -0.41
C9orf47-203ENST00000375851 ADAM18Q9Y3Q7 739 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 TMEM184BQ9Y519 407 aaPredicted RBP12.51□□□□□ -0.41
C9orf47-203ENST00000375851 KIAA1217Q5T5P2 1943 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 COL5A3P25940 1745 aaPredicted RBP12.51□□□□□ -0.41
C9orf47-203ENST00000375851 TSPAN11A1L157 253 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 OR7C1O76099 320 aaPredicted RBP12.51□□□□□ -0.41
C9orf47-203ENST00000375851 VEGFCP49767 419 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 PSPHP78330 225 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 TSC22D1Q15714 1073 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 EXOSC6Q5RKV6 272 aaKnown RBP12.51□□□□□ -0.41
C9orf47-203ENST00000375851 PAQR6Q6TCH4 344 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 MEX3BQ6ZN04 569 aaKnown RBP12.51□□□□□ -0.41
C9orf47-203ENST00000375851 SLC16A9Q7RTY1 509 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 OR5D18Q8NGL1 313 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 RSPRY1Q96DX4 576 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 MVB12AQ96EY5 273 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 CSF3RQ99062 836 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 CDCA4Q9BXL8 241 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 TMEM59Q9BXS4 323 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 CDCP1Q9H5V8 836 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 SIAEQ9HAT2 523 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 NOSIPQ9Y314 301 aaKnown RBP12.51□□□□□ -0.41
C9orf47-203ENST00000375851 COL4A5P29400 1685 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 RP1P56715 2156 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 P2RX6O15547 441 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 ATG12O94817 140 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 AKR7A3O95154 331 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 SLC2A10O95528 541 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 EXT1Q16394 746 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 C1orf53Q5VUE5 145 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 LIPNQ5VXI9 398 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 SULF2Q8IWU5 870 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 DNAAF1Q8NEP3 725 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 OR4M1Q8NGD0 313 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 OR51D1Q8NGF3 324 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 FNDC9Q8TBE3 224 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 CHRNA9Q9UGM1 479 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 KCND3Q9UK17 655 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 SPTA1P02549 2419 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 ATG2BQ96BY7 2078 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 IFNA2P01563 188 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 CHRNB1P11230 501 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 PTPN6P29350 595 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 RPL27P61353 136 aaKnown RBP12.51□□□□□ -0.41
C9orf47-203ENST00000375851 GABREP78334 506 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 RAB11FIP2Q7L804 512 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 FER1L6-AS2Q96M78 137 aa12.51□□□□□ -0.41
C9orf47-203ENST00000375851 COA3Q9Y2R0 106 aaPredicted RBP12.51□□□□□ -0.41
C9orf47-203ENST00000375851 ZC3H12DA2A288 527 aaKnown RBP12.5□□□□□ -0.41
C9orf47-203ENST00000375851 ASPDHA6ND91 283 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 METTL12A8MUP2 240 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 FCGR2AP12318 317 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 ENPP1P22413 925 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 CYB561P49447 251 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 FAHD1Q6P587 224 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 VASH1Q7L8A9 365 aaPredicted RBP12.5□□□□□ -0.41
C9orf47-203ENST00000375851 IL1F10Q8WWZ1 152 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 ARL5BQ96KC2 179 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 EMC6Q9BV81 110 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 SEMA4CQ9C0C4 833 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 RNF167Q9H6Y7 350 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 ACKR4Q9NPB9 350 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 MUTYHQ9UIF7 546 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 S100A2P29034 98 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 DLSTP36957 453 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 RRADP55042 308 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 DCXRQ7Z4W1 244 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 TMEM99Q8N816 258 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 SLC25A43Q8WUT9 341 aaPredicted RBP12.5□□□□□ -0.41
C9orf47-203ENST00000375851 TXNDC15Q96J42 360 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 CMSS1Q9BQ75 279 aaKnown RBP12.5□□□□□ -0.41
C9orf47-203ENST00000375851 METTL9Q9H1A3 318 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 EHFQ9NZC4 300 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms