RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ARL6IP6Q8N6S5 226 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 C16orf78Q8WTQ4 265 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 C15orf40Q8WUR7 153 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 NEURL3Q96EH8 262 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 BMFQ96LC9 184 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 SSX3Q99909 188 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 RSPO3Q9BXY4 272 aaPredicted RBP11.12□□□□□ -0.63
C9orf3-203ENST00000375315 CXorf36Q9H7Y0 433 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 MIEF1Q9NQG6 463 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 INPP5EQ9NRR6 644 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 COMMD9Q9P000 198 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 ASH2LQ9UBL3 628 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 AK6Q9Y3D8 172 aaKnown RBP11.12□□□□□ -0.63
C9orf3-203ENST00000375315 DYRK1BQ9Y463 629 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 A0A087WUU8 490 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 LOC390937A0A1W2PQ73 354 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 ZNF705EA8MWA4 302 aaPredicted RBP11.12□□□□□ -0.63
C9orf3-203ENST00000375315 NPC1O15118 1278 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 FARS2O95363 451 aaKnown RBP11.12□□□□□ -0.63
C9orf3-203ENST00000375315 CELA2BP08218 269 aaPredicted RBP11.12□□□□□ -0.63
C9orf3-203ENST00000375315 APEHP13798 732 aaKnown RBP11.12□□□□□ -0.63
C9orf3-203ENST00000375315 SDHAP31040 664 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 RAB5CP51148 216 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 TAS2R50P59544 299 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 CHAF1BQ13112 559 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 ALKBH1Q13686 389 aaKnown RBP11.12□□□□□ -0.63
C9orf3-203ENST00000375315 C4orf46Q504U0 113 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 TMEM69Q5SWH9 247 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 ADAMTSL4Q6UY14 1074 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 COMMD6Q7Z4G1 85 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 SYT9Q86SS6 491 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 NKAIN4Q8IVV8 208 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 POMGNT2Q8NAT1 580 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 AKR7LQ8NHP1 331 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 S100A16Q96FQ6 103 aaKnown RBP11.12□□□□□ -0.63
C9orf3-203ENST00000375315 COX14Q96I36 57 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 ZNF514Q96K75 400 aaPredicted RBP11.12□□□□□ -0.63
C9orf3-203ENST00000375315 LURAP1Q96LR2 239 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 OR52A5Q9H2C5 316 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 MYNNQ9NPC7 610 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 HINT3Q9NQE9 182 aaKnown RBP11.12□□□□□ -0.63
C9orf3-203ENST00000375315 TBC1D29Q9UFV1 150 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 GPR179Q6PRD1 2367 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 C17orf113A0A1B0GUU1 675 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 A0A1W2PPK0 400 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 OR2AT4A6NND4 320 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 F5H0A9 414 aaPredicted RBP11.11□□□□□ -0.63
C9orf3-203ENST00000375315 FADS1O60427 444 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 MT-ND4LP03901 98 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 CD2P06729 351 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 ANXA2P07355 339 aaKnown RBP11.11□□□□□ -0.63
C9orf3-203ENST00000375315 HOXC4P09017 264 aaPredicted RBP11.11□□□□□ -0.63
C9orf3-203ENST00000375315 RCC1P18754 421 aaPredicted RBP11.11□□□□□ -0.63
C9orf3-203ENST00000375315 CSNK1EP49674 416 aaKnown RBP11.11□□□□□ -0.63
C9orf3-203ENST00000375315 PNLIPRP1P54315 467 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 FAM71E1Q6IPT2 247 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 ZNF765Q7L2R6 523 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 SLC29A4Q7RTT9 530 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 OVCH1Q7RTY7 1134 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 C17orf47Q8NEP4 570 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 PIGXQ8TBF5 258 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 PAQR8Q8TEZ7 354 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 FAM46AQ96IP4 442 aaKnown RBP11.11□□□□□ -0.63
C9orf3-203ENST00000375315 TOLLIPQ9H0E2 274 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 A0A1W2PPE3 182 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 PRSS38A1L453 326 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 ANKRD61A6NGH8 418 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 J3QLW9 94 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 SLC34A2O95436 690 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 IGHV2-5P01817 119 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 NQO2P16083 231 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 NPPBP16860 134 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 ZNF19P17023 458 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 P2RX1P51575 399 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 CBFBQ13951 182 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 FAM111BQ6SJ93 734 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 ABHD13Q7L211 337 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 DMRTC2Q8IXT2 367 aaPredicted RBP11.11□□□□□ -0.63
C9orf3-203ENST00000375315 SLC43A2Q8N370 569 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 GHSRQ92847 366 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 HIST1H2BAQ96A08 127 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 C14orf144Q96I85 54 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 NECAB3Q96P71 396 aaPredicted RBP11.11□□□□□ -0.63
C9orf3-203ENST00000375315 TEX101Q9BY14 249 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 MFRPQ9BY79 579 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 DPEP2Q9H4A9 486 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 TNFSF18Q9UNG2 199 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 ASXL3Q9C0F0 2248 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 AP4M1O00189 453 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 FGF16O43320 207 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 OR8U8P0C7N1 319 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 HTR5AP47898 357 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 TAS2R41P59536 307 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 RBM39Q14498 530 aaKnown RBP11.11□□□□□ -0.63
C9orf3-203ENST00000375315 CSRP2Q16527 193 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 PLEKHN1Q494U1 663 aaPredicted RBP11.11□□□□□ -0.63
C9orf3-203ENST00000375315 PARGQ86W56 976 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 OR6T1Q8NGN1 323 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 MMP26Q9NRE1 261 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 ATXN7L1Q9ULK2 861 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms