RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ZNF28P17035 718 aa11.36□□□□□ -0.59
NPLOC4-202ENST00000374747 CHRNEQ04844 493 aa11.36□□□□□ -0.59
NPLOC4-202ENST00000374747 LTB4RQ15722 352 aa11.36□□□□□ -0.59
NPLOC4-202ENST00000374747 ADPRMQ3LIE5 342 aa11.36□□□□□ -0.59
NPLOC4-202ENST00000374747 CD276Q5ZPR3 534 aa11.36□□□□□ -0.59
NPLOC4-202ENST00000374747 LILRA6Q6PI73 481 aa11.36□□□□□ -0.59
NPLOC4-202ENST00000374747 MBOAT2Q6ZWT7 520 aa11.36□□□□□ -0.59
NPLOC4-202ENST00000374747 SCARB1Q8WTV0 552 aa11.36□□□□□ -0.59
NPLOC4-202ENST00000374747 CRB3Q9BUF7 120 aa11.36□□□□□ -0.59
NPLOC4-202ENST00000374747 TMEM59Q9BXS4 323 aa11.36□□□□□ -0.59
NPLOC4-202ENST00000374747 SIAEQ9HAT2 523 aa11.36□□□□□ -0.59
NPLOC4-202ENST00000374747 HS3ST3A1Q9Y663 406 aa11.36□□□□□ -0.59
NPLOC4-202ENST00000374747 CROCCQ5TZA2 2017 aa11.36□□□□□ -0.59
NPLOC4-202ENST00000374747 PRAMEF27A3QJZ7 478 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 RNF212BA8MTL3 300 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 TACR1P25103 407 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 RNF4P78317 190 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 PRAMEF9Q5VWM5 478 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 RAB3CQ96E17 227 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 UHRF2Q96PU4 802 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 SIDT1Q9NXL6 827 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 TRDV1A0A1B0GX56 115 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 OR2A25A4D2G3 310 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 TRAPPC2LH3BP13 241 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 ADAM10O14672 748 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 GPR75O95800 540 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 POU3F1Q03052 451 aaPredicted RBP11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 SLC7A6Q92536 515 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 SMLR1H3BR10 107 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 F13BP05160 661 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 LPLP06858 475 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 CHRM4P08173 479 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 PTBP1P26599 531 aaKnown RBP eCLIP11.35□□□□□ -0.591e-6■■■■□ 21.7
NPLOC4-202ENST00000374747 PSMB5P28074 263 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 THBS3P49746 956 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 DPTQ07507 201 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 NR0B2Q15466 257 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 STEAP1BQ6NZ63 245 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 SLCO4C1Q6ZQN7 724 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 TMEM106AQ96A25 262 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 ALG12Q9BV10 488 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 SLCO5A1Q9H2Y9 848 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 SRPK3Q9UPE1 567 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 SNX11Q9Y5W9 270 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 TNS1Q9HBL0 1735 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 TMEM72A0PK05 275 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 C20orf202A1L168 122 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 ATP6V1G2-DDX39BF2Z307 99 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 BCAT2O15382 392 aaPredicted RBP11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 HTR1FP30939 366 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 LIPAP38571 399 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 B3GLCTQ6Y288 498 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 NLRP8Q86W28 1048 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 MFSD9Q8NBP5 474 aa11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 PATZ1Q9HBE1 687 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-202ENST00000374747 C17orf112F2Z3M2 114 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 CLN5O75503 358 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 KCNK5O95279 499 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 BMP1P13497 986 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 VASPP50552 380 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 PCBD1P61457 104 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 BTG1P62324 171 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 SRPXP78539 464 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 OR52W1Q6IF63 320 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 MOB3CQ70IA8 216 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 BHLHA9Q7RTU4 235 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 ZNF610Q8N9Z0 462 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 CHTF18Q8WVB6 975 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 NAT6Q93015 286 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 MARC2Q969Z3 335 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 NIPSNAP3BQ9BS92 247 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 KATNB1Q9BVA0 655 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 SIT1Q9Y3P8 196 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 A0A1B0GTW7 788 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 C2orf72A6NCS6 295 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 PMS2P2O95744 297 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 OMGP23515 440 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 PCSK6P29122 969 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 KIAA1024LP59773 190 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 ABHD17BQ5VST6 288 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 FAM57BQ71RH2 274 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 BPHLQ86WA6 291 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 VRK3Q8IV63 474 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 KIAA1958Q8N8K9 716 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 OR52I1Q8NGK6 324 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 OR4Q3Q8NH05 313 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 PSMF1Q92530 271 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 STARD5Q9NSY2 213 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 PCDHGA1Q9Y5H4 931 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 AIFM1O95831 613 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 ATP1B1P05026 303 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 CCR6P51684 374 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 MZT1Q08AG7 82 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 SF3B4Q15427 424 aaKnown RBP eCLIP11.34□□□□□ -0.595e-7■■■■■ 50.9
NPLOC4-202ENST00000374747 HEPHL1Q6MZM0 1159 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 SSX9Q7RTT3 188 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 CADM3Q8N126 398 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 ZNF439Q8NDP4 499 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 PHYHIPQ92561 330 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 RAB39BQ96DA2 213 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms